Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value seq858 89.7 8e-13 >seq858 Length=1962 Score = 89.7 bits (98), Expect = 8e-13 Identities = 130/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 196754 CTGTCAGCTTTACCAGCGCAGTGCAGACGTCTTCCTCGGTGTCCCGTTCAACATCGCTTC 196813 ||| ||||| || || ||| || || || ||||| || || |||||||||||||| || Sbjct 1802 CTGCCAGCTGTATCAACGCTCAGCCGATGTGTTCCTAGGGGTGCCGTTCAACATCGCCTC 1743 Query 196814 GTACGCTCTGTTGGTTCACATGGTGGCACAGCAGGTCAATATGGTGGCGGGTGATTTCGT 196873 ||||| ||| | |||||| |||| || || ||| | |||| |||||||| Sbjct 1742 CTACGCCCTGCTCACGCACATGCTGGCCAAGGTCGTGGGGCTGGAGCCGGGCGATTTCGT 1683 Query 196874 CTGGACGGGCGGCGATACCCATCTGTACTCT-AACCATCTGGAACAGGCCACGTTGCAGC 196932 | || |||||| |||| ||||| ||| ||||||||||| |||||| | |||| | Sbjct 1682 CCACACCTTCGGCGACGCCCACCTGTA-TCTGAACCATCTGGAGCAGGCCGAGCTGCAAC 1624 Query 196933 T 196933 | Sbjct 1623 T 1623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 770289771799600