Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20exspectatus_20[WormBase_20PRJEB6009-WS248_202015-08- 25] 4,412 sequences; 177,635,997 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq520 95.1 1e-14 >seq520 Length=99801 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| | || |||||| | || ||| |||| |||||||| | Sbjct 58868 ATGCAAATTTTCGTCAAAACGCTCACCGGAAAAACCATCACCCTCGAGGTCGAGGCTTCC 58927 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| ||||| ||||| || || || ||||||||||| Sbjct 58928 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGATCAG 58987 Query 24111 CAGAGACTGATTTACGGCGG 24130 |||||||| || | || ||| Sbjct 58988 CAGAGACTTATCTTCGCCGG 59007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429912881803860