Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20exspectatus_20[WormBase_20PRJEB6009-WS248_202015-08- 25] 4,412 sequences; 177,635,997 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq888 280 1e-69 seq1973 217 1e-50 seq285 125 5e-23 seq1854 116 2e-20 seq908 116 2e-20 seq812 116 2e-20 seq4 87.8 1e-11 >seq888 Length=55613 Score = 280 bits (310), Expect = 1e-69 Identities = 575/840 (68%), Gaps = 26/840 (3%) Strand=Plus/Plus Query 475358 GTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT- 475416 ||| || | ||||| |||||| | ||| | || || |||||||| ||| | ||| | | Sbjct 5324 GTACGATCTACAGCAGGAGATACTCATTTAGGAGGAGAAGATTTCGATCAGAGAATACTC 5383 Query 475417 -ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAAT--AAAGTTGATCTTTCAACATCTGC 475473 | ||| ||| || |||| ||||||||| | | |||| ||| | | | ||| Sbjct 5384 CAACAT--TGTCTTACTGATTACAAGAGGAAGAGTGGAAAG--GATATCAAAGGAAATGC 5439 Query 475474 TAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGC 475533 | || | || | | ||||| || |||||| | || ||| || | | || || Sbjct 5440 TCGTGCTCTTCGAAGATTAAGAACAGCATGTGAAAGAGCGAAGAGAACATTATCATCAAG 5499 Query 475534 TACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTAT 475593 | || || || ||||||||||||| ||| ||||||| |||| ||| || | | Sbjct 5500 TGCTGAAGCTGTGATTGAAGTTGATTCACTTCATGAAGGAGTTGACTATCATGCCAAGTT 5559 Query 475594 TACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGT 475653 ||||| ||| ||| ||||| | ||| ||||||| || | || ||| | ||||| || Sbjct 5560 GACAAGAGCTCGATTCGAAGAATTGTGTGCTGATCTATTCCGGAAGACATTGGAACCAGT 5619 Query 475654 TGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGT 475713 || | | ||| ||||| | ||| | ||||||||| | | || || | ||| | || Sbjct 5620 GGAGAAGGCTCTTCGAGATGCGAAAATGGACAAATCATCAATTCAAGACGTCGTTTTGGT 5679 Query 475714 AGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAA-TGCTTTCATCATATTTTAATGGTA 475772 ||||| || || |||||||| | || ||||| | ||| | | | | || | | Sbjct 5680 TGGAGGATCTACTCGAATTCCACGAGTAC-AGAAACTTCTTGC-TGACTTCTTCGGAGGA 5737 Query 475773 AA--AAGTTA--AATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTC 475828 || || | | || || | ||||| |||||||| ||||| ||||||||||| || Sbjct 5738 AAGGAACTCTGTACTGGAA---TCAATCCCGATGAAGCCGTTGCCTATGGAGCTGCAGTA 5794 Query 475829 CAAGCAGCTATTTTATCAGG---TCAATCAGACGAGAAACTAAATAATATTGTACTTGTT 475885 ||||| |||||| ||||||| |||| ||| | | | || || || |||| ||| Sbjct 5795 CAAGCTGCTATTCTATCAGGAGTTCAA---GACTCAACAGTCAAGGATGTTCTACTCGTT 5851 Query 475886 GACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATT 475945 || || ||||||||||||| || | || || | |||||| ||||||| ||| | Sbjct 5852 GATGTTGCTCCACTTTCATTGGGAATCGAGACTGCTGGAGGAGTTATGACATCACTTGTA 5911 Query 475946 GACAGAAATACTCCTATCCC-ATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAA 476004 || || ||||||| ||| || | | | || || | ||| ||||||||| ||||||| Sbjct 5912 GATAGGAATACTCGTATTCCTACTCGAGCTATGAAGAC-ATTCTCCACTTATGCTGATAA 5970 Query 476005 TCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAA 476064 |||| || ||| |||| ||| | || ||||| ||| || | | || || |||||| | Sbjct 5971 TCAACCAGGAGTATCCATTCAAGTATTCGAAGGAGAACGAGCACTTACCAAGGATAATCA 6030 Query 476065 CAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAAT 476124 ||||||||| || | || || ||||||||||| || |||||||||||||| || Sbjct 6031 TCAACTTGGAAACTTCGAACTATCTGGAATTCCTCCTGCACCAAGAGGAGTTCCTCAGAT 6090 Query 476125 TGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184 |||||| || || |||||||||||||| ||||| ||| |||||| ||||| || Sbjct 6091 TGAAGTCGTATTCGAGATTGATGCAAATGGAATTCTGGCTGTGACTGCTACGGATAAGTC 6150 Score = 120 bits (132), Expect = 2e-21 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||||| || || ||| | ||||| ||||| ||||| | || | |||||||| | Sbjct 4239 GCAATCGGAATCGATCTGGGAACGACTTATTCATGTGTTGGAGTCTACCAAAATGGACGA 4298 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| || || || || ||||| || | ||| || || ||||| ||| | || ||| Sbjct 4299 GTTGAAATCATCGCGAAAGATCAAGGAAACAAAACCACTCCTTCATACGTTGCATTCACT 4358 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || ||||| ||| |||||||| | || || ||||||||||| ||||| || ||| Sbjct 4359 GATGATGAACGACTTGTTGGAGATTCAGCAAAGGATCAAGCTGCAAGGAATCCAGTCAAT 4418 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGG 474537 ||||| || |||||||| ||| | || || Sbjct 4419 ACTATCTTCGATGCTAAGAGACTCATCGG 4447 Score = 116 bits (128), Expect = 2e-20 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||||| || || ||| | ||||| ||||| ||||| | || | |||||||| | Sbjct 2022 GCAATCGGAATCGATCTGGGAACGACTTATTCATGTGTTGGAGTCTACCAAAATGGACGA 2081 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| || || || || ||||| || | || || || ||||| ||| | || ||| Sbjct 2082 GTTGAAATCATCGCGAACGATCAAGGAAACAAGACCACTCCTTCATACGTTGCATTCACT 2141 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || ||||| ||| |||||||| | || || ||||||||||| ||||| || ||| Sbjct 2142 GATGATGAACGACTTGTTGGAGATTCAGCAAAGGATCAAGCTGCAAGGAATCCAGTCAAT 2201 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGG 474537 ||||| || |||||||| ||| | || || Sbjct 2202 ACTATCTTCGATGCTAAGAGACTCATCGG 2230 Score = 105 bits (116), Expect = 4e-17 Identities = 139/189 (74%), Gaps = 8/189 (4%) Strand=Plus/Plus Query 474734 GATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGAT 474793 || || || ||||| || ||||| || || || || |||||||| |||||||| || ||| Sbjct 5087 GAAGCCGTGATTACCGTACCAGCGTACTTCAACGACTCTCAACGACAAGCAACGAAGGAT 5146 Query 474794 GCGGGAAGAATTGCAGGTCTTAA-TGTTTTACGTATTATTAATGAACCAACAGCAGCCGC 474852 || | || || | ||||| || ||| || ||||| ||||||||||| ||||| || || Sbjct 5147 GCAGCAACCATCTCTGGTCTCAAGTGTCTT-CGTATCATTAATGAACCGACAGCTGCTGC 5205 Query 474853 ACTTGCTTATGGTCTTGATAAGAAT---TCTGACAAAGAAGTAAATGTTTTAATCTTTGA 474909 | | || ||||| | || |||||| |||| ||| |||||| || |||||||| Sbjct 5206 ATTGGCATATGGATTGGACAAGAATCCATCTG---GAGAGAGAAATGTGTTGATCTTTGA 5262 Query 474910 TTGTGGAGG 474918 | ||||| Sbjct 5263 TCTCGGAGG 5271 >seq1973 Length=12115 Score = 217 bits (240), Expect = 1e-50 Identities = 288/396 (73%), Gaps = 8/396 (2%) Strand=Plus/Minus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGG---T 475849 ||||| ||||| |||||||| ||||||||||| || ||||| |||||| ||||||| | Sbjct 1364 AATCCCGATGATGCTGTTGCCTATGGAGCTGCAGTTCAAGCTGCTATTCTATCAGGAGTT 1305 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909 ||| ||| | | | || || || |||| ||||| || ||||||||||||| || Sbjct 1304 CAA---GACTCAACAGTCAAGGATGTTCTACTCGTTGATGTTGCTCCACTTTCATTGGGA 1248 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATG- 475968 | || || | |||||| ||||||| ||| | || |||||||||| || ||| Sbjct 1247 ATCGAGACTGCTGGAGGAGTTATGACATCACTTGTCGATAGAAATACTCGCATTCCAACT 1188 Query 475969 CAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAAT 476028 | | || || | ||| ||||||||| ||||||||||| || || |||| ||| | Sbjct 1187 CGAGCTATGAAGAC-ATTCTCCACTTATGCTGATAATCAACCAGGAGTTTCCATTCAAGT 1129 Query 476029 CTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGA 476088 || ||||| ||| || | || || |||||| | ||||||||| || | || Sbjct 1128 ATTCGAAGGAGAACGAGCTCTTACCAAGGATAATCATTAACTTGGAAACTTCGAACTATC 1069 Query 476089 AGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGC 476148 || ||||||||||| || |||||||||||||| |||||||| || || |||||||| Sbjct 1068 TGGAATTCCTCCTGCACCAAGAGGAGTTCCTCAGATTGAAGTCTTATTCGAGATTGATGC 1009 Query 476149 AAATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184 |||||| |||||| ||| |||||| ||||| || Sbjct 1008 AAATGGAATTCTTGCTGTGACTGCTACGGATAAGTC 973 Score = 116 bits (128), Expect = 2e-20 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||||| || || ||| | ||||| ||||| ||||| | || | || ||||| | Sbjct 2955 GCAATCGGAATCGATCTGGGAACGACTTATTCATGTGTTGGAGTCTACCAGAATGGACGA 2896 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| || || ||||| ||||| || | || || || || || ||| | || ||| Sbjct 2895 GTTGAAATCATCGCGAATGATCAAGGAAACAAGACCACTCCTTCCTACGTTGCATTCACT 2836 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || ||||| ||| ||||||| ||||||| ||||||||||| ||||| || ||| Sbjct 2835 GATGATGAACGACTTGTTGGAGACTCTGCTAATGATCAAGCTGCAAGGAATCCAGTCAAT 2776 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGG 474537 ||||| || |||||||| ||| | || || Sbjct 2775 ACTATCTTCGATGCTAAGAGACTCATCGG 2747 Score = 96.9 bits (106), Expect = 2e-14 Identities = 228/338 (67%), Gaps = 10/338 (3%) Strand=Plus/Minus Query 475358 GTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT- 475416 ||| || ||||||| |||||| | ||| | || || |||||||| ||| | ||| | | Sbjct 1944 GTACGATCAACAGCAGGAGATACTCATTTAGGAGGAGAAGATTTCGATCAGAGAATACTC 1885 Query 475417 -ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAAT--AAAGTTGATCTTTCAACATCTGC 475473 | ||| ||| | |||| ||||||||| | | |||| ||| | | | ||| Sbjct 1884 CAACAT--TGTCTCACTGATTACAAGAGGAAGAGTGGAAAG--GATATCAAAGGAAATGC 1829 Query 475474 TAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGC 475533 | || | || | | ||||| || |||||| | || ||| || | | || || Sbjct 1828 TCGTGCTCTTCGAAGATTAAGAACAGCATGTGAAAGAGCGAAGAGAACATTATCATCAAG 1769 Query 475534 TACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTAT 475593 | || || || ||||||||||||| ||| ||||||| ||||||| || | | || Sbjct 1768 TGCTGAAGCTGTGATTGAAGTTGATTCACTTCATGAAGGAGTTGATTACCATGC-CAAAT 1710 Query 475594 T-ACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCG 475652 | ||||| ||| ||| ||||| | ||| ||||||| || | || ||| | ||||| | Sbjct 1709 TGACAAGAGCTCGATTCGAAGAATTGTGTGCTGATCTATTCCGGAAGACATTGGAACCAG 1650 Query 475653 TTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCA 475690 | || | | ||| ||||| | ||| | ||||||||| Sbjct 1649 TGGAGAAGGCTCTTCGAGATGCGAAAATGGACAAATCA 1612 Score = 96.9 bits (106), Expect = 2e-14 Identities = 135/188 (72%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 474734 GATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGAT 474793 || || || ||||| || || || || || |||||||||||||| |||||||| || ||| Sbjct 2181 GAAGCCGTGATTACCGTACCTGCCTACTTCAATGATTCTCAACGACAAGCAACGAAGGAT 2122 Query 474794 GCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCA 474853 || | || || | ||||| || | ||||||| || |||||||| || || || ||| Sbjct 2121 GCAGCAACCATCTCTGGTCTCAAGTGTCTACGTATCATCAATGAACCTACTGCTGCTGCA 2062 Query 474854 CTTGCTTATGGTCTTGATAAGAAT---TCTGACAAAGAAGTAAATGTTTTAATCTTTGAT 474910 | || ||||| | || |||||| |||| ||| |||||| | ||||||||| Sbjct 2061 TTGGCATATGGATTGGACAAGAATCTATCTG---GAGAGAGAAATGTGCTGATCTTTGAT 2005 Query 474911 TGTGGAGG 474918 ||||| Sbjct 2004 CTCGGAGG 1997 >seq285 Length=161344 Score = 125 bits (138), Expect = 5e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||||| || || ||| | ||||| ||||| ||||| | || | |||||||| | Sbjct 86676 GCAATCGGAATCGATCTGGGAACGACTTATTCATGTGTTGGAGTCTACCAAAATGGACGA 86735 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| || || ||||| ||||| || | ||| || || || || ||| | || ||| Sbjct 86736 GTTGAAATCATCGCGAATGATCAAGGAAACAAAACCACTCCTTCCTACGTTGCATTCACT 86795 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || ||||| ||| ||||||| ||||||| ||||||||||| ||||| || ||| Sbjct 86796 GATGATGAACGACTTGTTGGAGACTCTGCTAAGGATCAAGCTGCAAGGAATCCAGTCAAT 86855 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGG 474537 ||||| || |||||||| ||| | || || Sbjct 86856 ACTATCTTCGATGCTAAGAGACTCATCGG 86884 >seq1854 Length=14611 Score = 116 bits (128), Expect = 2e-20 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||||| || || ||| | ||||| ||||| ||||| | || | || ||||| | Sbjct 13607 GCAATCGGAATCGATCTGGGAACGACTTATTCGTGTGTTGGAGTCTACCAGAATGGACGA 13666 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| || || ||||| ||||| || | || || || |||| ||| | || ||| Sbjct 13667 GTTGAAATCATCGCGAATGATCAAGGAAACAAGACCACTCCTTCATGCGTTGCATTCACT 13726 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || ||||| ||| ||||||| ||||||| ||||||||||| ||||| || ||| Sbjct 13727 GATGATGAACGACTTGTTGGAGACTCTGCTAAGGATCAAGCTGCAAGGAATCCAGTCAAT 13786 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGG 474537 ||||| || |||||||| ||| | || || Sbjct 13787 ACTATCTTCGATGCTAAGAGACTCATCGG 13815 Score = 102 bits (112), Expect = 5e-16 Identities = 136/188 (72%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 474734 GATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGAT 474793 || || || ||||| || || || || || |||||||||||||| |||||||| || ||| Sbjct 14419 GAAGCCGTGATTACCGTACCTGCCTACTTCAATGATTCTCAACGACAAGCAACGAAGGAT 14478 Query 474794 GCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCA 474853 || | || || | ||||| || | ||||||| || |||||||| || || || ||| Sbjct 14479 GCAGCAACCATCTCTGGTCTCAAGTGTCTACGTATCATCAATGAACCTACTGCTGCTGCA 14538 Query 474854 CTTGCTTATGGTCTTGATAAGAAT---TCTGACAAAGAAGTAAATGTTTTAATCTTTGAT 474910 | || ||||| | || |||||| |||| ||| |||||| || ||||||||| Sbjct 14539 TTGGCATATGGATTGGACAAGAATCTATCTG---GAGAGAGAAATGTGTTGATCTTTGAT 14595 Query 474911 TGTGGAGG 474918 ||||| Sbjct 14596 CTCGGAGG 14603 >seq908 Length=54638 Score = 116 bits (128), Expect = 2e-20 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||||| || || ||| | ||||| ||||| ||||| | || | || ||||| | Sbjct 37183 GCAATCGGAATCGATCTGGGAACGACTTATTCATGTGTTGGAGTCTACCAGAATGGACGA 37242 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| || || ||||| ||||| || | || || || || || ||| | || ||| Sbjct 37243 GTTGAAATCATCGCGAATGATCAAGGAAACAAGACCACTCCTTCCTACGTTGCATTCACT 37302 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || ||||| ||| ||||||| ||||||| ||||||||||| ||||| || ||| Sbjct 37303 GATGATGAACGACTTGTTGGAGACTCTGCTAAGGATCAAGCTGCAAGGAATCCAGTCAAT 37362 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGG 474537 ||||| || |||||||| ||| | || || Sbjct 37363 ACTATCTTCGATGCTAAGAGACTCATCGG 37391 Score = 96.9 bits (106), Expect = 2e-14 Identities = 135/188 (72%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 474734 GATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGAT 474793 || || || ||||| || || || || || |||||||||||||| |||||||| || ||| Sbjct 37957 GAAGCCGTGATTACCGTACCTGCCTACTTCAATGATTCTCAACGACAAGCAACGAAGGAT 38016 Query 474794 GCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCA 474853 || | || || | ||||| || | ||||||| || |||||||| || || || ||| Sbjct 38017 GCAGCAACCATCTCTGGTCTCAAGTGTCTACGTATCATCAATGAACCTACTGCTGCTGCA 38076 Query 474854 CTTGCTTATGGTCTTGATAAGAAT---TCTGACAAAGAAGTAAATGTTTTAATCTTTGAT 474910 | || ||||| | || |||||| |||| ||| |||||| | ||||||||| Sbjct 38077 TTGGCATATGGATTGGACAAGAATCTATCTG---GAGAGAGAAATGTGCTGATCTTTGAT 38133 Query 474911 TGTGGAGG 474918 ||||| Sbjct 38134 CTCGGAGG 38141 Score = 96.9 bits (106), Expect = 2e-14 Identities = 228/338 (67%), Gaps = 10/338 (3%) Strand=Plus/Plus Query 475358 GTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT- 475416 ||| || ||||||| |||||| | ||| | || || |||||||| ||| | ||| | | Sbjct 38194 GTACGATCAACAGCAGGAGATACTCATTTAGGAGGAGAAGATTTCGATCAGAGAATACTC 38253 Query 475417 -ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAAT--AAAGTTGATCTTTCAACATCTGC 475473 | ||| ||| | |||| ||||||||| | | |||| ||| | | | ||| Sbjct 38254 CAACAT--TGTCTCACTGATTACAAGAGGAAGAGTGGAAAG--GATATCAAAGGAAATGC 38309 Query 475474 TAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGC 475533 | || | || | | ||||| || |||||| | || ||| || | | || || Sbjct 38310 TCGTGCTCTTCGAAGATTAAGAACAGCATGTGAAAGAGCGAAGAGAACATTATCATCAAG 38369 Query 475534 TACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTAT 475593 | || || || ||||||||||||| ||| ||||||| ||||||| || | | || Sbjct 38370 TGCTGAAGCTGTGATTGAAGTTGATTCACTTCATGAAGGAGTTGATTACCATGC-CAAAT 38428 Query 475594 T-ACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCG 475652 | ||||| ||| ||| ||||| | ||| ||||||| || | || ||| | ||||| | Sbjct 38429 TGACAAGAGCTCGATTCGAAGAATTGTGTGCTGATCTATTCCGGAAGACATTGGAACCAG 38488 Query 475653 TTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCA 475690 | || | | ||| ||||| | ||| | ||||||||| Sbjct 38489 TGGAGAAGGCTCTTCGAGATGCGAAAATGGACAAATCA 38526 >seq812 Length=62635 Score = 116 bits (128), Expect = 2e-20 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||||| || || ||| | ||||| ||||| ||||| | || | || ||||| | Sbjct 424 GCAATCGGAATCGATCTGGGAACGACTTATTCGTGTGTTGGAGTCTACCAGAATGGACGA 365 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| || || ||||| ||||| || | || || || |||| ||| | || ||| Sbjct 364 GTTGAAATCATCGCGAATGATCAAGGAAACAAGACCACTCCTTCATGCGTTGCATTCACT 305 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || ||||| ||| ||||||| ||||||| ||||||||||| ||||| || ||| Sbjct 304 GATGATGAACGACTTGTTGGAGACTCTGCTAAGGATCAAGCTGCAAGGAATCCAGTCAAT 245 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGG 474537 ||||| || |||||||| ||| | || || Sbjct 244 ACTATCTTCGATGCTAAGAGACTCATCGG 216 >seq4 Length=755106 Score = 87.8 bits (96), Expect = 1e-11 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 356436 TCTTACATTTAGTGGTTTTCCTTTTAATGGGAAAATACCATAATAATCTCTTCCGACAAC 356495 ||| ||||| ||| |||| || | | |||||| | ||||| ||||||||| ||||| Sbjct 23967 TCTGACATTGAGTAGTTTACCCCTCAGTGGGAATACTCCATATCTATCTCTTCCTACAAC 24026 Query 356496 ATTTAATCCAGACATAGCAAATGCTTTAGCTGAATCTCCTTCAGTAAGAAT 356546 ||||||||| | ||| |||| |||||||||||||| ||||| ||||| Sbjct 24027 TCCTAATCCAGATACAGCCAATGTATTAGCTGAATCTCCCTCAGTGAGAAT 24077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267989947912976