Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20exspectatus_20[WormBase_20PRJEB6009-WS248_202015-08- 25] 4,412 sequences; 177,635,997 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq88 100 3e-16 >seq88 Length=301248 Score = 100 bits (110), Expect = 3e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 75933 AGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATC 75992 |||| || |||||| ||||||||||||| ||||| |||| ||||||||| | || |||| Sbjct 193385 AGGACGCCTGTAACGCGAAGAGTAACCAACAGAATCTGGGTACAATCAAGTGTTCCAATC 193326 Query 75993 TTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCAT 76052 | || ||||| || | ||||| || ||||| ||| ||||||||| | || | Sbjct 193325 TGTGTACGGAGATCGTGGAGTATTCATCCCCTGATGAAGTGGCCGTTTGCAATCTCGCGT 193266 Query 76053 CAATCGCCCTTCCAAAGTATGTCAATGAAG 76082 | ||||| ||||| | | |||||||||| Sbjct 193265 CCATCGCTCTTCCCAGATTCGTCAATGAAG 193236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596536699186560