Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20exspectatus_20[WormBase_20PRJEB6009-WS248_202015-08- 25] 4,412 sequences; 177,635,997 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq520 87.8 2e-12 >seq520 Length=99801 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || | |||||||| ||||| ||||| || || ||||| || || || | Sbjct 58867 GATGCAAATTTTCGTCAAAACGCTCACCGGAAAAACCATCACCCTCGAGGTCGAGGCTTC 58926 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || |||||||| ||||| || ||||| ||||||||||| Sbjct 58927 CGACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGATCA 58986 Query 24823 ACAACGTTTGATCTTTGCCGG 24843 || | | ||||| ||||| Sbjct 58987 GCAGAGACTTATCTTCGCCGG 59007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449872788147360