Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20exspectatus_20[WormBase_20PRJEB6009-WS248_202015-08- 25] 4,412 sequences; 177,635,997 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq60 116 9e-21 >seq60 Length=331869 Score = 116 bits (128), Expect = 9e-21 Identities = 103/128 (80%), Gaps = 3/128 (2%) Strand=Plus/Minus Query 110667 AAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATAT 110726 || ||| |||| | |||||||||||| ||| | |||| |||||| | ||||| |||||| Sbjct 158514 AATGGTACTTCGAATGGACTTGTTCCCATGCTTCGAGTATTCAACAATACTGCCAAATAT 158455 Query 110727 GTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCAT 110783 ||| ||||||| || ||||||| ||| |||| || |||||||||||||| |||||| Sbjct 158454 GTGGATCAAGGAGGAAATAAGAGACCTGGAGCATTCGCAATCTATCTCGAACCATGGCAT 158395 Query 110784 TCAGATAT 110791 ||||||| Sbjct 158394 GCAGATAT 158387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186745710955932