Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20exspectatus_20[WormBase_20PRJEB6009-WS248_202015-08- 25] 4,412 sequences; 177,635,997 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq888 279 2e-69 seq1973 197 4e-45 seq285 134 4e-26 seq1854 125 2e-23 seq908 125 2e-23 seq812 125 2e-23 >seq888 Length=55613 Score = 279 bits (308), Expect = 2e-69 Identities = 777/1180 (66%), Gaps = 23/1180 (2%) Strand=Plus/Plus Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 || || || ||||| |||||||| || || || || | || || ||||| || ||| Sbjct 5087 GAAGCCGTGATTACCGTACCAGCGTACTTCAACGACTCTCAACGACAAGCAACGAAGGAT 5146 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 || | | ||| | || | || ||| | || ||||||||||| || ||||| ||| Sbjct 5147 GCAGCAACCATCTCTGGTCTCAAGTGTCTTCGTATCATTAATGAACCGACAGCTGCTGCA 5206 Query 349727 ATTGCATATGGGCTTGATAAAATGAGTGACCA-----AGaaaaaaaTATTCTTATTTTTG 349781 | |||||||| | || || || | ||| ||| | |||| | | || |||| Sbjct 5207 TTGGCATATGGATTGGACAA---GAAT--CCATCTGGAGAGAGAAATGTGTTGATCTTTG 5261 Query 349782 ATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT---TTTG 349838 || | || || || || || |||||||| | |||||| | || ||| | || | Sbjct 5262 ATCTCGGAGGAGGAACATTCGATGTATCGATTCTAACAATCTCTGAAGGATCTCTATTCG 5321 Query 349839 AAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCG 349898 |||| | | || || || ||||| ||| | || ||||||||||| ||| | | | Sbjct 5322 AAGTACGATCTACAGCAGGAGATACTCATTTAGGAGGAGAAGATTTCGATCAGAGAATAC 5381 Query 349899 TTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTA 349958 | |||| | ||| || | ||| | | | || ||||| || ||| || Sbjct 5382 TCCAACATTGTCTTACTGATTACAAGAGGAAGAGTGGAAAGGATATCAAAGGAAATGCTC 5441 Query 349959 GAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTA 350018 | || | || | ||||||| || |||||| | || ||| | | |||||||| | | Sbjct 5442 GTGCTCTTCGAAGATTAAGAACAGCATGTGAAAGAGCGAAGAGAACATTATCATCAAGTG 5501 Query 350019 CCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATT-TCTTTTCATCTATT 350077 | || | |||||| ||||||| ||| ||| || || | || | || | | Sbjct 5502 CTGAAGCTGTGATTGAAGTTGATTCACTTCATGAAGGAGTTGACTATCATGCCAAGT-TG 5560 Query 350078 ACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTG 350137 ||| | ||||| || |||||||| ||| ||||| || | ||| |||| || ||| Sbjct 5561 ACAAGAGCTCGATTCGAAGAATTGTGTGCTGATCTATTCCGGAAGACATTGGAACCAGTG 5620 Query 350138 GAAAAAGTATTAAAAGATGCAAAAATGTCCAAAA-ATCAGATTGATGAAGTAGTTTTAGT 350196 || || | | |||||| |||||| |||| |||| ||| | || || ||||| || Sbjct 5621 GAGAAGGCTCTTCGAGATGCGAAAATGGACAAATCATCA-ATTCAAGACGTCGTTTTGGT 5679 Query 350197 TGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAA 350256 ||| || ||||| || |||||| ||| || | | || |||| || || || || Sbjct 5680 TGGAGGATCTACTCGAATTCCACGAGTACAGAAACTTCTTGCTGACTTCTTCGGAGGAAA 5739 Query 350257 AGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 |||| | || ||| ||||| |||||||| ||||| ||||| ||||| || || || Sbjct 5740 GGAACTCTGTACTGGAATCAATCCCGATGAAGCCGTTGCCTATGGAGCTGCAGTACAAGC 5799 Query 350317 ATCTATTTTATCTGGAAAT-AAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAA 350375 ||||| |||| ||| | |||| | | | | | | ||| | |||| | ||||| Sbjct 5800 TGCTATTCTATCAGGAGTTCAAGACT-CAACAGTCAAGGATGTTCTACTCGTTGATGTTG 5858 Query 350376 CTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAA 350435 |||||||||| | ||| | || ||| |||| | ||| ||||| ||| | ||| | Sbjct 5859 CTCCACTTTCATTGGGAATCGAGACTGCTGGAGGAGTTATGACATCACTTGTAGATAGGA 5918 Query 350436 ATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAG 350495 ||| | | | ||||| | | || || || || | ||| |||||||| |||| Sbjct 5919 ATACTCGTATTCCTACTCGAGCTATGAAGACATTCTCCACTTATGCTGATAATCAACCAG 5978 Query 350496 CGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTG 350555 ||| | ||||||||||| ||||| ||||| || | || || |||||| || |||||| Sbjct 5979 GAGTATCCATTCAAGTATTCGAAGGAGAACGAGCACTTACCAAGGATAATCATCAACTTG 6038 Query 350556 GAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCT 350615 || | || ||| || |||||| || || |||||||||||||||||||||||| Sbjct 6039 GAAACTTCGAACTATCTGGAATTCCTCCTGCACCAAGAGGAGTTCCTCAGATTGAAGTCG 6098 Query 350616 CTTTCGATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTA 350675 ||||| |||||| ||||||| ||| | ||| || || || || |||| ||| Sbjct 6099 TATTCGAGATTGATGCAAATGGAATTCTGGCTGTGACTGCTACGGATAAGTCAACTGG-- 6156 Query 350676 AAAGTAGTAAGGTAGAA--ATTACTAATGATAAATCTAGACTTTCAAAAGAAGATATTGA 350733 |||| || | | | | || | ||||| || || | || ||||| ||||| Sbjct 6157 AAAGAAGAATGCAATCACTATCAAGAATGAGAAGGGACGATTGAGTAAGGAAGAAATTGA 6216 Query 350734 GAAAATGACACAAGATGCCGAATCATATGCTAAGGAAGAT 350773 ||| ||| |||||||| | ||||| |||||||| Sbjct 6217 GAAGATGGTTCAAGATGCAGCCAAATATGAAGAGGAAGAT 6256 Score = 244 bits (270), Expect = 3e-59 Identities = 603/908 (66%), Gaps = 19/908 (2%) Strand=Plus/Minus Query 182894 TCCAGTTGATTTTTCAAGTGCGCTAACATTTAAAATACCATTAGAGTCAACATCAAATGA 182953 ||||||||| || || || | ||| | ||| ||||| | |||| || ||| Sbjct 6157 TCCAGTTGACTTATCCGTAGCAGTCACAGCCAGAATTCCATTTGCATCAATCTCGAATAC 6098 Query 182954 TACTTCAATCTGTGGAACACCTCGTGGCATTGGTGGAATTCCAGTTAAAGTAAATTCACC 183013 ||||||||||| ||||| |||| ||| || |||||||||| || || | || Sbjct 6097 GACTTCAATCTGAGGAACTCCTCTTGGTGCAGGAGGAATTCCAGATAGTTCGAAGTTTCC 6038 Query 183014 TAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCCTTCATATACTTGAATAGTAACTGC 183073 | || || |||||| || || ||||| || ||||| |||||||||| | ||| | Sbjct 6037 AAGTTGATGATTATCCTTGGTAAGTGCTCGTTCTCCTTCGAATACTTGAATGGATACTCC 5978 Query 183074 TGGCTGATTATCACTATAAGTAGAAAAAACTTGCTTTTTATT---AATAGGAATAGTTGA 183130 ||| ||||||||| |||||| || || | ||| || | |||||||| | Sbjct 5977 TGGTTGATTATCAGCATAAGTGGAGAA---TGTCTTCATAGCTCGAGTAGGAATACGAGT 5921 Query 183131 ATTTCGCGGAACAATTACAGTCATTACTTCTCTGGCAGTTTCTAATCCTAATGATAATGG 183190 ||| | |||| | ||||| ||| ||| ||||| || | ||| ||||| | ||| Sbjct 5920 ATTCCTATCTACAAGTGATGTCATAACTCCTCCAGCAGTCTCGATTCCCAATGAAAGTGG 5861 Query 183191 TGCTACATCTAGTAATAATAAATC--TGA-TGTTTTATCTGATTTAATATCACTTAAAAT 183247 || ||||| | | || | ||| ||| |||| ||| | || | || ||| Sbjct 5860 AGCAACATCAACGAGTAGAACATCCTTGACTGTTGAGTCT---TGAACTCCTGATAGAAT 5804 Query 183248 TGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAA 183307 |||||||| || || || ||||| ||||| |||||||| || || ||| | | | | Sbjct 5803 AGCAGCTTGTACTGCAGCTCCATAGGCAACGGCTTCATCGGGATTGATTCCAGTACAGAG 5744 Query 183308 TTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACC 183367 ||| || || || || || | ||| | || || | | |||||||| ||| || || Sbjct 5743 TTCCTTTCCTCCGAAGAAGTCAGCAAGAAGTTTCTGTACTCGTGGAATTCGAGTAGATCC 5684 Query 183368 ACCGACTAATACTACTTCATCGAT--ATTACTTTTACTAATTTGTGAATCTTTTAAAACT 183425 || || || || || || | || || | || | | |||| | |||| | | | Sbjct 5683 TCCAACCAAAACGACGTCTTGAATTGATGATTTGTCC--ATTTTCGCATCTCGAAGAGCC 5626 Query 183426 TTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCT 183485 || || || || |||| || || | |||| ||| ||| || ||||| |||| ||| Sbjct 5625 TTCTCCACTGGTTCCAATGTCTTCCGGAATAGATCAGCACACAATTCTTCGAATCGAGCT 5566 Query 183486 CTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTT 183545 || || || | | | |||||| || | || | ||||||| ||||||| | | Sbjct 5565 CTTGTCAACTTGGCATGATAGTCAACTCCTTCATGAAGTGAATCAACTTCAATCACAGCT 5506 Query 183546 TGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAAT 183605 | | | ||||||||||||||| || |||| ||||||||||||||||| || || | Sbjct 5505 TCAGCACTTGATGATAATGTTCTCTTCGCTCTTTCACATGCTGTTCTTAATCTTCGAAGA 5446 Query 183606 GATCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGT 183665 | | | ||| || | ||||| | | | || || || | ||||||| | ||||| Sbjct 5445 GCACGAGCATTTCCTTTGATATCCTTTCCACTCTTCCTCTTGTAATCAGTAAGACAATGT 5386 Query 183666 TGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTA 183725 || |||| ||| ||| |||||||| || |||||||| ||||| || || |||| | Sbjct 5385 TGGAGTATTCTCTGATCGAAATCTTCTCCTCCTAAATGAGTATCTCCTGCTGTAGATCGT 5326 Query 183726 ACTTCAAATA---TTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCC 183782 ||||| |||| ||| || || ||| ||| |||||||| ||||| || || || Sbjct 5325 ACTTCGAATAGAGATCCTTCAGAGATTGTTAGAATCGATACATCGAATGTTCCTCCTCCG 5266 Query 183783 AAATCAAA 183790 | |||||| Sbjct 5265 AGATCAAA 5258 Score = 140 bits (154), Expect = 1e-27 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || ||||||||| | || || |||||||| ||||||| || | ||||||| || Sbjct 4239 GCAATCGGAATCGATCTGGGAACGACTTATTCATGTGTTGGAGTCTACCAAAATGGACGA 4298 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| || || || |||||||| |||| ||| || || |||||||||||||| || Sbjct 4299 GTTGAAATCATCGCGAAAGATCAAGGAAACAAAACCACTCCTTCATACGTTGCATTCACT 4358 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||| || | |||| ||||| ||||| |||||||||| |||||| ||| Sbjct 4359 GATGATGAACGACTTGTTGGAGATTCAGCAAAGGATCAAGCTGCAAGGAATCCAGTCAAT 4418 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG 349410 || | || ||||||||| |||| || || || Sbjct 4419 ACTATCTTCGATGCTAAGAGACTCATCGGAAG 4450 Score = 134 bits (148), Expect = 4e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || ||||||||| | || || |||||||| ||||||| || | ||||||| || Sbjct 2022 GCAATCGGAATCGATCTGGGAACGACTTATTCATGTGTTGGAGTCTACCAAAATGGACGA 2081 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| || || || |||||||| |||| || || || |||||||||||||| || Sbjct 2082 GTTGAAATCATCGCGAACGATCAAGGAAACAAGACCACTCCTTCATACGTTGCATTCACT 2141 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||| || | |||| ||||| ||||| |||||||||| |||||| ||| Sbjct 2142 GATGATGAACGACTTGTTGGAGATTCAGCAAAGGATCAAGCTGCAAGGAATCCAGTCAAT 2201 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG 349410 || | || ||||||||| |||| || || || Sbjct 2202 ACTATCTTCGATGCTAAGAGACTCATCGGAAG 2233 >seq1973 Length=12115 Score = 197 bits (218), Expect = 4e-45 Identities = 401/591 (68%), Gaps = 6/591 (1%) Strand=Plus/Minus Query 350186 GTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTT 350245 || ||||| ||||| || ||||| || |||||| ||| || | | || |||| || Sbjct 1454 GTCGTTTTGGTTGGAGGATCTACTCGAATTCCACGAGTACAGAAACTTCTTGCTGACTTC 1395 Query 350246 TTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCT 350305 || || || |||| | || ||| ||||| ||||| |||||||| ||||| ||| Sbjct 1394 TTCGGAGGAAAGGAACTCTGTACTGGAATCAATCCCGATGATGCTGTTGCCTATGGAGCT 1335 Query 350306 GCTGTTCAGGCATCTATTTTATCTGGAAAT-AAGAGTTCTAAAATTGATGATCTATTACT 350364 || ||||| || ||||| |||| ||| | |||| | | | | | | ||| | |||| Sbjct 1334 GCAGTTCAAGCTGCTATTCTATCAGGAGTTCAAGACT-CAACAGTCAAGGATGTTCTACT 1276 Query 350365 ACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCT 350424 | ||||| |||||||||| | ||| | || ||| |||| | ||| ||||| || Sbjct 1275 CGTTGATGTTGCTCCACTTTCATTGGGAATCGAGACTGCTGGAGGAGTTATGACATCACT 1216 Query 350425 TATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGA 350484 | | |||||||| | | || || | | || || || || | ||| || Sbjct 1215 TGTCGATAGAAATACTCGCATTCCAACTCGAGCTATGAAGACATTCTCCACTTATGCTGA 1156 Query 350485 TAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAA 350544 |||||| |||| || | ||||||||||| ||||| ||||| |||| || || ||||| Sbjct 1155 TAATCAACCAGGAGTTTCCATTCAAGTATTCGAAGGAGAACGAGCTCTTACCAAGGATAA 1096 Query 350545 TAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCA 350604 | || |||||||| | || ||| || |||||| || || |||||||||||||| Sbjct 1095 TCATTAACTTGGAAACTTCGAACTATCTGGAATTCCTCCTGCACCAAGAGGAGTTCCTCA 1036 Query 350605 GATTGAAGTCTCTTTCGATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAA 350664 ||||||||||| ||||| |||||| ||||||| ||| | ||| || || || || Sbjct 1035 GATTGAAGTCTTATTCGAGATTGATGCAAATGGAATTCTTGCTGTGACTGCTACGGATAA 976 Query 350665 ATCAAGTGGTAAAAGTAGTAAGGTAGAA--ATTACTAATGATAAATCTAGACTTTCAAAA 350722 |||| ||| |||| || | | | | || | ||||| || || | || Sbjct 975 GTCAACTGG--AAAGAAGAATGCAATCACTATCAAGAATGAGAAGGGACGATTGAGTAAG 918 Query 350723 GAAGATATTGAGAAAATGACACAAGATGCCGAATCATATGCTAAGGAAGAT 350773 ||||| |||||||| ||| |||||||| | ||||| |||||||| Sbjct 917 GAAGAAATTGAGAAGATGGTTCAAGATGCAGCCAAATATGAAGAGGAAGAT 867 Score = 125 bits (138), Expect = 2e-23 Identities = 249/368 (68%), Gaps = 3/368 (1%) Strand=Plus/Plus Query 183426 TTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCT 183485 || || || || |||| || || | |||| ||| ||| || ||||| |||| ||| Sbjct 1643 TTCTCCACTGGTTCCAATGTCTTCCGGAATAGATCAGCACACAATTCTTCGAATCGAGCT 1702 Query 183486 CTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTT 183545 || || || | | | |||| || | || | ||||||| ||||||| | | Sbjct 1703 CTTGTCAATTTGGCATGGTAATCAACTCCTTCATGAAGTGAATCAACTTCAATCACAGCT 1762 Query 183546 TGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAAT 183605 | | | ||||||||||||||| || |||| ||||||||||||||||| || || | Sbjct 1763 TCAGCACTTGATGATAATGTTCTCTTCGCTCTTTCACATGCTGTTCTTAATCTTCGAAGA 1822 Query 183606 GATCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGT 183665 | | | ||| || | ||||| | | | || || || | ||||| | | ||||| Sbjct 1823 GCACGAGCATTTCCTTTGATATCCTTTCCACTCTTCCTCTTGTAATCAGTGAGACAATGT 1882 Query 183666 TGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTA 183725 || |||| ||| ||| |||||||| || |||||||| ||||| || || || | | Sbjct 1883 TGGAGTATTCTCTGATCGAAATCTTCTCCTCCTAAATGAGTATCTCCTGCTGTTGATCGT 1942 Query 183726 ACTTCAAATA---TTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCC 183782 ||||| |||| ||| || || ||| ||| |||||||| ||||| || || || Sbjct 1943 ACTTCGAATAGAGATCCTTCCGAGATTGTTAGAATCGATACATCGAATGTTCCTCCTCCG 2002 Query 183783 AAATCAAA 183790 | |||||| Sbjct 2003 AGATCAAA 2010 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || ||||||||| | || || |||||||| ||||||| || | || |||| || Sbjct 2955 GCAATCGGAATCGATCTGGGAACGACTTATTCATGTGTTGGAGTCTACCAGAATGGACGA 2896 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| || || ||||||||||| |||| || || || || ||||||||||| || Sbjct 2895 GTTGAAATCATCGCGAATGATCAAGGAAACAAGACCACTCCTTCCTACGTTGCATTCACT 2836 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||| || | |||| || ||||| || |||||||||| |||||| ||| Sbjct 2835 GATGATGAACGACTTGTTGGAGACTCTGCTAATGATCAAGCTGCAAGGAATCCAGTCAAT 2776 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG 349410 || | || ||||||||| |||| || || || Sbjct 2775 ACTATCTTCGATGCTAAGAGACTCATCGGAAG 2744 Score = 123 bits (136), Expect = 8e-23 Identities = 327/495 (66%), Gaps = 12/495 (2%) Strand=Plus/Plus Query 182894 TCCAGTTGATTTTTCAAGTGCGCTAACATTTAAAATACCATTAGAGTCAACATCAAATGA 182953 ||||||||| || || || | ||| | ||| ||||| | |||| || ||| | Sbjct 966 TCCAGTTGACTTATCCGTAGCAGTCACAGCAAGAATTCCATTTGCATCAATCTCGAATAA 1025 Query 182954 TACTTCAATCTGTGGAACACCTCGTGGCATTGGTGGAATTCCAGTTAAAGTAAATTCACC 183013 ||||||||||| ||||| |||| ||| || |||||||||| || || | || Sbjct 1026 GACTTCAATCTGAGGAACTCCTCTTGGTGCAGGAGGAATTCCAGATAGTTCGAAGTTTCC 1085 Query 183014 TAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCCTTCATATACTTGAATAGTAACTGC 183073 | || || |||||| || || |||| || ||||| |||||||||| | |||| | Sbjct 1086 AAGTTAATGATTATCCTTGGTAAGAGCTCGTTCTCCTTCGAATACTTGAATGGAAACTCC 1145 Query 183074 TGGCTGATTATCACTATAAGTAGAAAAAACTTGCTTTTTA---TTAATAGGAATAGTTGA 183130 ||| ||||||||| |||||| || || | ||| || | | ||||| | Sbjct 1146 TGGTTGATTATCAGCATAAGTGGAGAA---TGTCTTCATAGCTCGAGTTGGAATGCGAGT 1202 Query 183131 ATTTCGCGGAACAATTACAGTCATTACTTCTCTGGCAGTTTCTAATCCTAATGATAATGG 183190 ||||| |||| | ||||| ||| ||| ||||| || | ||| ||||| | ||| Sbjct 1203 ATTTCTATCGACAAGTGATGTCATAACTCCTCCAGCAGTCTCGATTCCCAATGAAAGTGG 1262 Query 183191 TGCTACATCTAGTAATAATAAATC--TGA-TGTTTTATCTGATTTAATATCACTTAAAAT 183247 || ||||| | | || | ||| ||| |||| || || || | || ||| Sbjct 1263 AGCAACATCAACGAGTAGAACATCCTTGACTGTTGAGTC---TTGAACTCCTGATAGAAT 1319 Query 183248 TGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAA 183307 ||||||||||| || || ||||| |||||||| ||||| || || ||| | | | | Sbjct 1320 AGCAGCTTGAACTGCAGCTCCATAGGCAACAGCATCATCGGGATTGATTCCAGTACAGAG 1379 Query 183308 TTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACC 183367 ||| || || || || || | ||| | || || | | |||||||| ||| || || Sbjct 1380 TTCCTTTCCTCCGAAGAAGTCAGCAAGAAGTTTCTGTACTCGTGGAATTCGAGTAGATCC 1439 Query 183368 ACCGACTAATACTAC 183382 || || || || || Sbjct 1440 TCCAACCAAAACGAC 1454 Score = 109 bits (120), Expect = 2e-18 Identities = 367/568 (65%), Gaps = 5/568 (1%) Strand=Plus/Minus Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 || || || ||||| ||||| ||||| || |||||| | || || ||||| || ||| Sbjct 2181 GAAGCCGTGATTACCGTACCTGCCTACTTCAATGATTCTCAACGACAAGCAACGAAGGAT 2122 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 || | | ||| | || | || |||| | || || |||||||| |||||||| ||| Sbjct 2121 GCAGCAACCATCTCTGGTCTCAAGTGTCTACGTATCATCAATGAACCTACTGCTGCTGCA 2062 Query 349727 ATTGCATATGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTT 349785 | |||||||| | || || ||| | | || | |||| | || || |||||| | Sbjct 2061 TTGGCATATGGATTGGACAAGAATCTATCTGGA-GAGAGAAATGTGCTGATCTTTGATCT 2003 Query 349786 AGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT---TTTGAAGT 349842 || || || || || |||||||| | |||||| | || ||| | || ||||| Sbjct 2002 CGGAGGAGGAACATTCGATGTATCGATTCTAACAATCTCGGAAGGATCTCTATTCGAAGT 1943 Query 349843 TAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTC 349902 | |||| || || ||||| ||| | || ||||||||||| ||| | | | | Sbjct 1942 ACGATCAACAGCAGGAGATACTCATTTAGGAGGAGAAGATTTCGATCAGAGAATACTCCA 1883 Query 349903 GCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGC 349962 |||| | | | || | ||| | | | || ||||| || ||| || | || Sbjct 1882 ACATTGTCTCACTGATTACAAGAGGAAGAGTGGAAAGGATATCAAAGGAAATGCTCGTGC 1823 Query 349963 AATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCA 350022 | || | ||||||| || |||||| | || ||| | | |||||||| | | | | Sbjct 1822 TCTTCGAAGATTAAGAACAGCATGTGAAAGAGCGAAGAGAACATTATCATCAAGTGCTGA 1763 Query 350023 AACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACG 350082 | | |||||| ||||||| ||| ||| || |||| | | | | ||| | Sbjct 1762 AGCTGTGATTGAAGTTGATTCACTTCATGAAGGAGTTGATTACCATGCCAAATTGACAAG 1703 Query 350083 TGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAA 350142 ||||| || |||||||| ||| ||||| || | ||| |||| || ||||| || Sbjct 1702 AGCTCGATTCGAAGAATTGTGTGCTGATCTATTCCGGAAGACATTGGAACCAGTGGAGAA 1643 Query 350143 AGTATTAAAAGATGCAAAAATGTCCAAA 350170 | | |||||| |||||| |||| Sbjct 1642 GGCTCTTCGAGATGCGAAAATGGACAAA 1615 >seq285 Length=161344 Score = 134 bits (148), Expect = 4e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || ||||||||| | || || |||||||| ||||||| || | ||||||| || Sbjct 86676 GCAATCGGAATCGATCTGGGAACGACTTATTCATGTGTTGGAGTCTACCAAAATGGACGA 86735 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| || || ||||||||||| |||| ||| || || || ||||||||||| || Sbjct 86736 GTTGAAATCATCGCGAATGATCAAGGAAACAAAACCACTCCTTCCTACGTTGCATTCACT 86795 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||| || | |||| || ||||| || |||||||||| |||||| ||| Sbjct 86796 GATGATGAACGACTTGTTGGAGACTCTGCTAAGGATCAAGCTGCAAGGAATCCAGTCAAT 86855 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG 349410 || | || ||||||||| |||| || || || Sbjct 86856 ACTATCTTCGATGCTAAGAGACTCATCGGAAG 86887 >seq1854 Length=14611 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || ||||||||| | || || |||||||| ||||||| || | || |||| || Sbjct 13607 GCAATCGGAATCGATCTGGGAACGACTTATTCGTGTGTTGGAGTCTACCAGAATGGACGA 13666 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| || || ||||||||||| |||| || || || |||| ||||||||| || Sbjct 13667 GTTGAAATCATCGCGAATGATCAAGGAAACAAGACCACTCCTTCATGCGTTGCATTCACT 13726 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||| || | |||| || ||||| || |||||||||| |||||| ||| Sbjct 13727 GATGATGAACGACTTGTTGGAGACTCTGCTAAGGATCAAGCTGCAAGGAATCCAGTCAAT 13786 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG 349410 || | || ||||||||| |||| || || || Sbjct 13787 ACTATCTTCGATGCTAAGAGACTCATCGGAAG 13818 >seq908 Length=54638 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || ||||||||| | || || |||||||| ||||||| || | || |||| || Sbjct 37183 GCAATCGGAATCGATCTGGGAACGACTTATTCATGTGTTGGAGTCTACCAGAATGGACGA 37242 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| || || ||||||||||| |||| || || || || ||||||||||| || Sbjct 37243 GTTGAAATCATCGCGAATGATCAAGGAAACAAGACCACTCCTTCCTACGTTGCATTCACT 37302 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||| || | |||| || ||||| || |||||||||| |||||| ||| Sbjct 37303 GATGATGAACGACTTGTTGGAGACTCTGCTAAGGATCAAGCTGCAAGGAATCCAGTCAAT 37362 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG 349410 || | || ||||||||| |||| || || || Sbjct 37363 ACTATCTTCGATGCTAAGAGACTCATCGGAAG 37394 Score = 125 bits (138), Expect = 2e-23 Identities = 249/368 (68%), Gaps = 3/368 (1%) Strand=Plus/Minus Query 183426 TTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCT 183485 || || || || |||| || || | |||| ||| ||| || ||||| |||| ||| Sbjct 38495 TTCTCCACTGGTTCCAATGTCTTCCGGAATAGATCAGCACACAATTCTTCGAATCGAGCT 38436 Query 183486 CTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTT 183545 || || || | | | |||| || | || | ||||||| ||||||| | | Sbjct 38435 CTTGTCAATTTGGCATGGTAATCAACTCCTTCATGAAGTGAATCAACTTCAATCACAGCT 38376 Query 183546 TGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAAT 183605 | | | ||||||||||||||| || |||| ||||||||||||||||| || || | Sbjct 38375 TCAGCACTTGATGATAATGTTCTCTTCGCTCTTTCACATGCTGTTCTTAATCTTCGAAGA 38316 Query 183606 GATCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGT 183665 | | | ||| || | ||||| | | | || || || | ||||| | | ||||| Sbjct 38315 GCACGAGCATTTCCTTTGATATCCTTTCCACTCTTCCTCTTGTAATCAGTGAGACAATGT 38256 Query 183666 TGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTA 183725 || |||| ||| ||| |||||||| || |||||||| ||||| || || || | | Sbjct 38255 TGGAGTATTCTCTGATCGAAATCTTCTCCTCCTAAATGAGTATCTCCTGCTGTTGATCGT 38196 Query 183726 ACTTCAAATA---TTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCC 183782 ||||| |||| ||| || || ||| ||| |||||||| ||||| || || || Sbjct 38195 ACTTCGAATAGAGATCCTTCCGAGATTGTTAGAATCGATACATCGAATGTTCCTCCTCCG 38136 Query 183783 AAATCAAA 183790 | |||||| Sbjct 38135 AGATCAAA 38128 Score = 109 bits (120), Expect = 2e-18 Identities = 367/568 (65%), Gaps = 5/568 (1%) Strand=Plus/Plus Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 || || || ||||| ||||| ||||| || |||||| | || || ||||| || ||| Sbjct 37957 GAAGCCGTGATTACCGTACCTGCCTACTTCAATGATTCTCAACGACAAGCAACGAAGGAT 38016 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 || | | ||| | || | || |||| | || || |||||||| |||||||| ||| Sbjct 38017 GCAGCAACCATCTCTGGTCTCAAGTGTCTACGTATCATCAATGAACCTACTGCTGCTGCA 38076 Query 349727 ATTGCATATGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTT 349785 | |||||||| | || || ||| | | || | |||| | || || |||||| | Sbjct 38077 TTGGCATATGGATTGGACAAGAATCTATCTGGA-GAGAGAAATGTGCTGATCTTTGATCT 38135 Query 349786 AGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT---TTTGAAGT 349842 || || || || || |||||||| | |||||| | || ||| | || ||||| Sbjct 38136 CGGAGGAGGAACATTCGATGTATCGATTCTAACAATCTCGGAAGGATCTCTATTCGAAGT 38195 Query 349843 TAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTC 349902 | |||| || || ||||| ||| | || ||||||||||| ||| | | | | Sbjct 38196 ACGATCAACAGCAGGAGATACTCATTTAGGAGGAGAAGATTTCGATCAGAGAATACTCCA 38255 Query 349903 GCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGC 349962 |||| | | | || | ||| | | | || ||||| || ||| || | || Sbjct 38256 ACATTGTCTCACTGATTACAAGAGGAAGAGTGGAAAGGATATCAAAGGAAATGCTCGTGC 38315 Query 349963 AATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCA 350022 | || | ||||||| || |||||| | || ||| | | |||||||| | | | | Sbjct 38316 TCTTCGAAGATTAAGAACAGCATGTGAAAGAGCGAAGAGAACATTATCATCAAGTGCTGA 38375 Query 350023 AACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACG 350082 | | |||||| ||||||| ||| ||| || |||| | | | | ||| | Sbjct 38376 AGCTGTGATTGAAGTTGATTCACTTCATGAAGGAGTTGATTACCATGCCAAATTGACAAG 38435 Query 350083 TGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAA 350142 ||||| || |||||||| ||| ||||| || | ||| |||| || ||||| || Sbjct 38436 AGCTCGATTCGAAGAATTGTGTGCTGATCTATTCCGGAAGACATTGGAACCAGTGGAGAA 38495 Query 350143 AGTATTAAAAGATGCAAAAATGTCCAAA 350170 | | |||||| |||||| |||| Sbjct 38496 GGCTCTTCGAGATGCGAAAATGGACAAA 38523 >seq812 Length=62635 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || ||||||||| | || || |||||||| ||||||| || | || |||| || Sbjct 424 GCAATCGGAATCGATCTGGGAACGACTTATTCGTGTGTTGGAGTCTACCAGAATGGACGA 365 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| || || ||||||||||| |||| || || || |||| ||||||||| || Sbjct 364 GTTGAAATCATCGCGAATGATCAAGGAAACAAGACCACTCCTTCATGCGTTGCATTCACT 305 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||| || | |||| || ||||| || |||||||||| |||||| ||| Sbjct 304 GATGATGAACGACTTGTTGGAGACTCTGCTAAGGATCAAGCTGCAAGGAATCCAGTCAAT 245 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG 349410 || | || ||||||||| |||| || || || Sbjct 244 ACTATCTTCGATGCTAAGAGACTCATCGGAAG 213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515168744562836