Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20exspectatus_20[WormBase_20PRJEB6009-WS248_202015-08- 25] 4,412 sequences; 177,635,997 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq138 87.8 2e-12 >seq138 Length=243692 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 59982 CGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATT 60041 |||||||| || || || ||||| || || ||||||||||| ||||||||| || || Sbjct 113809 CGTCTCATCGCCTTCGCCTGCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCGGCCATC 113868 Query 60042 TTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCC 60101 |||||||| || ||| | || |||||||| || || | | || || ||||| || || Sbjct 113869 TTCTGGCTGAAGAAGAGAGGACTCATGCCCGGACTCACTCATTCGAATGAGCTCATCTCG 113928 Query 60102 CGG 60104 ||| Sbjct 113929 CGG 113931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548494548857280