Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20exspectatus_20[WormBase_20PRJEB6009-WS248_202015-08- 25] 4,412 sequences; 177,635,997 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq138 84.2 2e-11 >seq138 Length=243692 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 ||||||||| | || || ||||| ||||| | |||||||| ||| |||||||| | Sbjct 113918 TCATTCGAATGAGTGAGTCCGGGCATGAGTCCTCTCTTCTTCAGCCAGAAGATGGCCGCG 113859 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA 74908 || || || |||||||||||| ||||| || || ||||||| || || | |||||| Sbjct 113858 AACGAGCCCGAGAAGAAGATGCCCTCGACGCAGGCGAAGGCGATGAGACGCTCCGCGAA 113800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547185821037600