Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20pacificus_20[genbank_20GCA_5F000180635.2_202015-04- 03] 13,758 sequences; 133,113,749 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq9143 93.3 8e-14 >seq9143 Length=31746 Score = 93.3 bits (102), Expect = 8e-14 Identities = 81/98 (83%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGG 42780 ||||||||||||||||||||||||| | ||||| ||||||||||||| ||| ||| ||| Sbjct 9551 CGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCGGCCATCTTCTGGCTGAAGAAGAGAGG 9492 Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATC 42818 || |||||||||||||| || || || |||||| Sbjct 9491 ACTC-ATGCCCGGACTCACTCATTCCAATGAGCTCATC 9455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944176797266080