Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20pacificus_20[genbank_20GCA_5F000180635.2_202015-04- 03] 13,758 sequences; 133,113,749 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq11464 107 3e-18 >seq11464 Length=31009 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 197149 CCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGTTTG 197208 || ||||||| |||||| || ||||| | ||| || || | ||||| |||||||||||| Sbjct 24413 CCCATAACCAACAGATCGAGTGTGTCTCCCACTCCCTCGAGATAATCCTTCTTCAGTTTG 24472 Query 197209 AGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGATC 197268 ||||| | |||||||| |||||||| || | ||| || ||||||| ||||| | | Sbjct 24473 AGCCAATTATGCGATCTCTTTGCAATCTCATACGATGCATTCTCGTCCAGCGTCTTCACC 24532 Query 197269 ATCAATCCCTCGCA 197282 |||| |||||||| Sbjct 24533 ATCAGACCCTCGCA 24546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676613219427040