Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20pacificus_20[genbank_20GCA_5F000180635.2_202015-04- 03] 13,758 sequences; 133,113,749 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq9143 104 4e-17 >seq9143 Length=31746 Score = 104 bits (114), Expect = 4e-17 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 48166 GATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAAT 48225 ||||||| | ||||| ||| || ||||||| || |||| || |||||||| || Sbjct 9455 GATGAGCTCATTGGAATGAGTGAGTCCGGGCATGAGTCCTCTCTTCTTCAGCCAGAAGAT 9514 Query 48226 TGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTC 48285 |||||||| ||||| ||||||||||||||||| || |||||| ||| | || | ||| Sbjct 9515 GGCCGCGAACGAGCCCGAGAAGAAGATGCCCTCGACGCACGCGAAAGCGATCAGACGCTC 9574 Query 48286 TCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315 |||| || | |||||||| | |||||| Sbjct 9575 AGCGAAGGAGGACTTCTTGTCAGCGATCCA 9604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931372599646720