Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20pacificus_20[genbank_20GCA_5F000180635.2_202015-04- 03] 13,758 sequences; 133,113,749 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq11767 84.2 1e-11 >seq11767 Length=21069 Score = 84.2 bits (92), Expect = 1e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 25387 GAACGTATCTGCTAATCCCTGAACTCCTAATCCAACTGGACGATGTTTATTATTACTTAT 25446 ||| ||||| || |||||||||||||| ||||| | || |||||| | ||||| ||| | Sbjct 20292 GAAGGTATCAGCCAATCCCTGAACTCCCAATCCGATCGGTCGATGTCTCTTATTGCTTCT 20351 Query 25447 CTCAGTTTCTGATGTTGGATAGAAATTTGTATCGATCACATTATCTAGATT 25497 ||| | ||| | |||||||| | ||| |||||| | |||| |||||| Sbjct 20352 CTCTGCTTCAGGGATTGGATAGTAGTTTACATCGATGATCTTATTTAGATT 20402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252997571359850