Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20pacificus_20[genbank_20GCA_5F000180635.2_202015-04- 03] 13,758 sequences; 133,113,749 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq9143 100 4e-16 >seq9143 Length=31746 Score = 100 bits (110), Expect = 4e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 130043 CGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAG 130102 || |||||||| ||||| || || || |||||||| || | |||||||| |||| Sbjct 9450 CGCGAGATGAGCTCATTGGAATGAGTGAGTCCGGGCATGAGTCCTCTCTTCTTCAGCCAG 9509 Query 130103 AAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGA 130162 || || || || ||||| ||||||||||| ||||| || |||||||| || | ||| Sbjct 9510 AAGATGGCCGCGAACGAGCCCGAGAAGAAGATGCCCTCGACGCACGCGAAAGCGATCAGA 9569 Query 130163 CGCTCAGCAAAGGAG 130177 |||||||| |||||| Sbjct 9570 CGCTCAGCGAAGGAG 9584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618328844606480