Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20pacificus_20[genbank_20GCA_5F000180635.2_202015-04- 03] 13,758 sequences; 133,113,749 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq184 289 9e-73 seq11105 282 1e-70 seq9234 271 2e-67 seq11608 91.5 4e-13 >seq184 Length=15381 Score = 289 bits (320), Expect = 9e-73 Identities = 700/1046 (67%), Gaps = 19/1046 (2%) Strand=Plus/Plus Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 || ||||| ||||| |||||||| || || || ||| | || || ||||| |||||| Sbjct 8892 GAAGCTGTAATTACCGTACCAGCGTACTTCAACGATTCTCAACGACAAGCAACGAAAGAT 8951 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 || | | ||| | || | || |||| | || || |||||||| || ||||| ||| Sbjct 8952 GCAGCAACCATCTCTGGTCTCAAGTGTCTACGTATCATCAATGAACCGACAGCTGCTGCA 9011 Query 349727 ATTGCATATGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTT 349785 | |||||||| | || || ||| | | || | |||| | || || |||||| | Sbjct 9012 TTGGCATATGGATTGGACAAGAATCTATCTGGA-GAGAGAAATGTGCTGATCTTTGATCT 9070 Query 349786 AGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT---TTTGAAGT 349842 || || || || || |||||||| | |||||| | || ||| | || ||||| Sbjct 9071 TGGAGGAGGAACATTCGATGTATCGATTCTAACAATATCGGAAGGATCTCTCTTCGAAGT 9130 Query 349843 TAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT--AATCGT-CTCGT 349899 | |||| || || ||||| ||| | || ||||||||||| ||| || || |||| Sbjct 9131 ACGATCAACAGCAGGAGATACTCATTTGGGAGGAGAAGATTTCGATCAAAGAGTACTCGA 9190 Query 349900 TTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAG 349959 |||| | || || || ||| | | | || ||||| || ||| || | Sbjct 9191 A---CATTGTCTTGCTGATTTCAAGAGGAAGAGTGGAAAGGATATCAAAGGAAATGCTCG 9247 Query 349960 AGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTAC 350019 || | || | | |||||||| |||||| | || ||| | | |||||||| | | | Sbjct 9248 TGCTCTTCGAAGATTGAGAACTGCATGTGAAAGAGCGAAGAGAACATTATCATCAAGTGC 9307 Query 350020 CCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATT-TCTTTTCATCTATTA 350078 || | |||||| ||||||| ||| ||| || || | || | || | | | Sbjct 9308 TGAAGCTGTGATTGAAGTTGATTCACTTCATGAAGGAGTTGACTATCATGCCAAGT-TGA 9366 Query 350079 CACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGG 350138 |||| ||||| || |||||||| ||| ||||| || | ||| |||| || |||| Sbjct 9367 CACGAGCTCGATTCGAAGAATTGTGTGCTGATCTATTCCGGAAGACATTGGAACCAGTGG 9426 Query 350139 AAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCA--GATTGATGAAGTAGTTTTAGT 350196 |||| | | |||||| || ||| | |||||| |||| | || || || || || Sbjct 9427 AAAAGGCCCTTCGAGATGCTAAGATGG--ATAAATCATCGATTCAAGACGTCGTATTGGT 9484 Query 350197 TGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAA 350256 ||| || ||||| || ||||||| ||| || | | || |||| || ||| || || Sbjct 9485 TGGAGGATCTACTCGAATTCCAAGAGTACAGAAACTTCTTGCTGACTTCTTTGGAGGAAA 9544 Query 350257 AGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 |||| | || ||| ||||| ||||||||||| || ||||| ||||| || || || Sbjct 9545 GGAACTCTGTACTGGAATCAATCCCGATGAAGCTGTAGCCTATGGAGCTGCAGTACAAGC 9604 Query 350317 ATCTATTTTATCTGGAAAT-AAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAA 350375 || || |||| ||| | |||| | | | | | | ||| | |||| | ||||| Sbjct 9605 TGCTGTTCTATCAGGAGTTCAAGACT-CAACAGTCAAAGATGTTCTACTCGTTGATGTTG 9663 Query 350376 CTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAA 350435 |||||||||| | ||| | || ||| |||| | ||| ||||| ||| | ||| | Sbjct 9664 CTCCACTTTCATTGGGAATCGAGACTGCTGGAGGAGTTATGACATCACTTGTCGATAGGA 9723 Query 350436 ATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAG 350495 ||| | | | ||||| | | || || || || | ||| |||||||| |||| Sbjct 9724 ATACTCGTATTCCTACTCGAGCTATGAAGACATTCTCCACTTATGCTGATAATCAACCAG 9783 Query 350496 CGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTG 350555 ||| | |||||||| || ||||| ||||| |||| || || |||||| || |||||| Sbjct 9784 GAGTATCCATTCAAGTCTTCGAAGGAGAACGAGCTCTTACCAAGGATAATCATCAACTTG 9843 Query 350556 GAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCT 350615 || | || || || |||||| || || |||||||| ||||||||||||||| Sbjct 9844 GAAACTTCGAACTGTCTGGAATTCCTCCTGCTCCAAGAGGAGTCCCTCAGATTGAAGTCG 9903 Query 350616 CTTTCGATATTGATTCAAATGGTATT 350641 ||||| |||||| | ||||| ||| Sbjct 9904 TATTCGAGATTGATGCTAATGGAATT 9929 Score = 214 bits (236), Expect = 5e-50 Identities = 601/912 (66%), Gaps = 27/912 (3%) Strand=Plus/Minus Query 182894 TCCAGTTGATTTTTCAAGTGCGCTAACATTTAAAATACCATTAGAGTCAACATCAAATGA 182953 ||||||||| || || || | ||| | ||| ||||||| |||| || ||| Sbjct 9962 TCCAGTTGACTTATCCGTAGCAGTCACAGCCAGAATTCCATTAGCATCAATCTCGAATAC 9903 Query 182954 TACTTCAATCTGTGGAACACCTCGTGGCATTGGTGGAATTCCAGTTAAAGTA--AATTCA 183011 ||||||||||| || || |||| ||| || |||||||||| | ||| || | Sbjct 9902 GACTTCAATCTGAGGGACTCCTCTTGGAGCAGGAGGAATTCCAG--ACAGTTCGAAGTTT 9845 Query 183012 CCTAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCCTTCATATACTTGAATAGTAACT 183071 || | || || |||||| || || |||| || ||||| | |||||||| | ||| Sbjct 9844 CCAAGTTGATGATTATCCTTGGTAAGAGCTCGTTCTCCTTCGAAGACTTGAATGGATACT 9785 Query 183072 GCTGGCTGATTATCACTATAAGTAGAAAAAACTTGCTTTTTATT---AATAGGAATAGTT 183128 |||| ||||||||| |||||| || || | ||| || | |||||||| Sbjct 9784 CCTGGTTGATTATCAGCATAAGTGGAGAA---TGTCTTCATAGCTCGAGTAGGAATACGA 9728 Query 183129 GAATTTCGCGGAACAATTACAGTCATTACTTCTCTGGCAGTTTCTAATCCTAATGATAAT 183188 | ||| | |||| | ||||| ||| ||| ||||| || | ||| ||||| | | Sbjct 9727 GTATTCCTATCGACAAGTGATGTCATAACTCCTCCAGCAGTCTCGATTCCCAATGAAAGT 9668 Query 183189 GGTGCTACATCTAGTAATAATAAATCT--GA-TGTTTTATCTGATTTAATATCACTTAAA 183245 || || ||||| | | || | |||| || |||| ||| | || | || | Sbjct 9667 GGAGCAACATCAACGAGTAGAACATCTTTGACTGTTGAGTCT---TGAACTCCTGATAGA 9611 Query 183246 ATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGAT 183305 | |||||||| || || || ||||| || ||||||||||| || || ||| | | | Sbjct 9610 ACAGCAGCTTGTACTGCAGCTCCATAGGCTACAGCTTCATCGGGATTGATTCCAGTACAG 9551 Query 183306 AATTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAA 183365 | ||| || || ||| || || | ||| | || || | | ||||||||| ||| || Sbjct 9550 AGTTCCTTTCCTCCAAAGAAGTCAGCAAGAAGTTTCTGTACTCTTGGAATTCGAGTAGAT 9491 Query 183366 CCACCGACTAATACTACTTCATCGAT--ATTACTTTTACTAATTTGTGAATCTTTTAAAA 183423 || || || ||||| || || | || || | || | | || | | |||| | Sbjct 9490 CCTCCAACCAATACGACGTCTTGAATCGATGATTTATCC--ATCTTAGCATCTCGAAGGG 9433 Query 183424 CTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTG 183483 | ||||| || || |||| || || | |||| ||| ||| || ||||| |||| | Sbjct 9432 CCTTTTCCACTGGTTCCAATGTCTTCCGGAATAGATCAGCACACAATTCTTCGAATCGAG 9373 Query 183484 CTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATG 183543 ||| || || | | | |||||| || | || | ||||||| ||||||| | Sbjct 9372 CTCGTGTCAACTTGGCATGATAGTCAACTCCTTCATGAAGTGAATCAACTTCAATCACAG 9313 Query 183544 TTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTA 183603 || | | ||||||||||||||| || |||| ||||||||| ||||| | || || | Sbjct 9312 CTTCAGCACTTGATGATAATGTTCTCTTCGCTCTTTCACATGCAGTTCTCAATCTTCGAA 9253 Query 183604 ATGATCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAAT 183663 | | | ||| || | ||||| | | | || || || || |||| || | ||| Sbjct 9252 GAGCACGAGCATTTCCTTTGATATCCTTTCCACTCTTCCTCTTGAAATCAGCAAGACAAT 9193 Query 183664 GTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTT 183723 ||| |||| |||| ||| |||||||| || || ||||| ||||| || || || | | Sbjct 9192 GTTCGAGTACTCTTTGATCGAAATCTTCTCCTCCCAAATGAGTATCTCCTGCTGTTGATC 9133 Query 183724 TAACTTCAAATA---TTCCGTCTTCAATAT--TTAAAATTGATACATCAAATGTACCACC 183778 ||||| || | ||| || | |||| ||| ||| |||||||| ||||| || || Sbjct 9132 GTACTTCGAAGAGAGATCCTTC--CGATATTGTTAGAATCGATACATCGAATGTTCCTCC 9075 Query 183779 ACCCAAATCAAA 183790 || | |||||| Sbjct 9074 TCCAAGATCAAA 9063 Score = 131 bits (144), Expect = 5e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || ||||||||| | || || |||||||| ||||||| || | || |||| || Sbjct 8035 GCAATCGGAATCGATCTGGGGACGACTTATTCGTGTGTTGGAGTCTACCAGAATGGACGA 8094 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| || || || |||||||| |||| || || || || ||||||||||| ||| Sbjct 8095 GTTGAAATCATCGCGAACGATCAAGGAAACAAGACCACTCCTTCCTACGTTGCATTCACC 8154 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||| || | ||||||| ||||| || |||||||||| |||||| ||| Sbjct 8155 GATGATGAACGACTTGTTGGTGACTCTGCCAAGGATCAAGCTGCAAGGAATCCAGTCAAT 8214 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG 349410 || | || ||||||||| |||| || || || Sbjct 8215 ACTATCTTCGATGCTAAGAGACTCATCGGAAG 8246 >seq11105 Length=19492 Score = 282 bits (312), Expect = 1e-70 Identities = 698/1045 (67%), Gaps = 17/1045 (2%) Strand=Plus/Plus Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 || ||||| ||||| |||||||| || || || ||| | || || ||||| |||||| Sbjct 3698 GAAGCTGTGATTACCGTACCAGCGTACTTCAACGATTCTCAACGACAAGCAACGAAAGAT 3757 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 || | | ||| | || | || |||| | || || |||||||| || ||||| ||| Sbjct 3758 GCAGCAACCATCTCTGGTCTCAAGTGTCTACGTATCATCAATGAACCGACAGCTGCTGCA 3817 Query 349727 ATTGCATATGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTT 349785 | |||||||| | || || ||| | | || | |||| | || || |||||| | Sbjct 3818 TTGGCATATGGATTGGACAAGAATCTATCTGGA-GAGAGAAATGTGCTGATCTTTGATCT 3876 Query 349786 AGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT---TTTGAAGT 349842 || || || || || |||||||| | |||||| | || ||| | || ||||| Sbjct 3877 TGGAGGAGGAACATTCGATGTATCGATTCTAACAATCTCGGAAGGATCTCTCTTCGAAGT 3936 Query 349843 TAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT--AATCGT-CTCGT 349899 | |||| || || ||||| ||| | || ||||||||||| ||| || || |||| Sbjct 3937 ACGATCAACAGCAGGAGATACTCATTTGGGAGGAGAAGATTTCGATCAAAGAGTACTCGA 3996 Query 349900 TTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAG 349959 |||| | || || || ||| | | | || ||||| || ||| || | Sbjct 3997 A---CATTGTCTTGCTGATTTCAAGAGGAAGAGTGGAAAGGATATCAAAGGAAATGCTCG 4053 Query 349960 AGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTAC 350019 || | || | | |||||||| |||||| | || ||| | | ||||||| | | | Sbjct 4054 TGCTCTTCGAAGATTGAGAACTGCATGTGAAAGAGCGAAGAGAACACTATCATCAAGTGC 4113 Query 350020 CCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATT-TCTTTTCATCTATTA 350078 || | |||||| ||||||| ||| ||| || || | || | || | | | Sbjct 4114 TGAAGCTGTGATTGAAGTTGATTCACTTCATGAAGGAGTTGACTATCATGCCAAGT-TGA 4172 Query 350079 CACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGG 350138 |||| ||||| || |||||||| ||| ||||| || | ||| |||| || |||| Sbjct 4173 CACGAGCTCGATTCGAAGAATTGTGTGCTGATCTATTCCGGAAGACATTGGAACCAGTGG 4232 Query 350139 AAAAAGTATTAAAAGATGCAAAAATGTCCAAAA-ATCAGATTGATGAAGTAGTTTTAGTT 350197 | || | | |||||| || ||| |||| ||| |||| | || || || || ||| Sbjct 4233 AGAAGGCCCTTCGAGATGCTAAGATGGACAAATCATC-GATTCAAGACGTCGTATTGGTT 4291 Query 350198 GGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAA 350257 || || ||||| || ||||||| ||| || | | || |||| || || || || Sbjct 4292 GGAGGATCTACTCGAATTCCAAGAGTACAGAAACTTCTTGCTGACTTCTTCGGAGGAAAG 4351 Query 350258 GAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCA 350317 |||| | || | | ||||| |||||||||||||| ||||| ||||| || || || Sbjct 4352 GAACTCTGTACTGGAGTCAATCCCGATGAAGCTGTTGCCTATGGAGCTGCAGTACAAGCT 4411 Query 350318 TCTATTTTATCTGGAAAT-AAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAAC 350376 || || |||| ||| | |||| || | | | | ||| | |||| | ||||| | Sbjct 4412 GCTGTTCTATCAGGAGTTCAAGA-CTCAACAGTCAAAGATGTTCTACTCGTTGATGTTGC 4470 Query 350377 TCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAA 350436 ||||||||| | ||| | || ||| |||| | ||| ||||| ||| | ||| || Sbjct 4471 TCCACTTTCATTGGGAATCGAGACTGCTGGAGGAGTTATGACATCACTTGTCGATAGGAA 4530 Query 350437 TAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGC 350496 || | | | ||||| | | || || | || | ||| |||||||| |||| Sbjct 4531 TACTCGTATTCCTACTCGAGCTATGAAGACATTCACCACTTATGCTGATAATCAACCAGG 4590 Query 350497 GGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGG 350556 || | |||||||| || ||||| ||||| |||| || || |||||| || ||||||| Sbjct 4591 AGTCTCTATTCAAGTCTTCGAAGGAGAACGAGCTCTTACCAAGGATAATCATCAACTTGG 4650 Query 350557 AGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTC 350616 | | || ||| || |||||| |||| || |||||||| ||||||||||||||| Sbjct 4651 AAACTTCGAACTATCTGGAATTCCTCCAACACCAAGAGGAGTCCCTCAGATTGAAGTCGT 4710 Query 350617 TTTCGATATTGATTCAAATGGTATT 350641 ||||| |||||| | ||||| ||| Sbjct 4711 ATTCGAGATTGATGCTAATGGAATT 4735 Score = 208 bits (230), Expect = 2e-48 Identities = 595/908 (66%), Gaps = 19/908 (2%) Strand=Plus/Minus Query 182894 TCCAGTTGATTTTTCAAGTGCGCTAACATTTAAAATACCATTAGAGTCAACATCAAATGA 182953 |||||| || || || ||| | ||| | ||| ||||||| |||| || ||| Sbjct 4768 TCCAGTCGACTTATCCGTTGCAGTCACAGCCAGAATTCCATTAGCATCAATCTCGAATAC 4709 Query 182954 TACTTCAATCTGTGGAACACCTCGTGGCATTGGTGGAATTCCAGTTAAAGTAAATTCACC 183013 ||||||||||| || || |||| ||| |||| |||||||||| || || | || Sbjct 4708 GACTTCAATCTGAGGGACTCCTCTTGGTGTTGGAGGAATTCCAGATAGTTCGAAGTTTCC 4649 Query 183014 TAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCCTTCATATACTTGAATAGTAACTGC 183073 | || || |||||| || || |||| || ||||| | |||||||||| ||| | Sbjct 4648 AAGTTGATGATTATCCTTGGTAAGAGCTCGTTCTCCTTCGAAGACTTGAATAGAGACTCC 4589 Query 183074 TGGCTGATTATCACTATAAGTAGAAAAAACTTGCTTTTTATT---AATAGGAATAGTTGA 183130 ||| ||||||||| |||||| | || | ||| || | |||||||| | Sbjct 4588 TGGTTGATTATCAGCATAAGTGGTGAA---TGTCTTCATAGCTCGAGTAGGAATACGAGT 4532 Query 183131 ATTTCGCGGAACAATTACAGTCATTACTTCTCTGGCAGTTTCTAATCCTAATGATAATGG 183190 ||| | |||| | ||||| ||| ||| ||||| || | ||| ||||| | ||| Sbjct 4531 ATTCCTATCGACAAGTGATGTCATAACTCCTCCAGCAGTCTCGATTCCCAATGAAAGTGG 4472 Query 183191 TGCTACATCTAGTAATAATAAATCT--GA-TGTTTTATCTGATTTAATATCACTTAAAAT 183247 || ||||| | | || | |||| || |||| ||| | || | || || Sbjct 4471 AGCAACATCAACGAGTAGAACATCTTTGACTGTTGAGTCT---TGAACTCCTGATAGAAC 4415 Query 183248 TGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAA 183307 |||||||| || || || ||||| |||||||||||||| || || | | | | | | Sbjct 4414 AGCAGCTTGTACTGCAGCTCCATAGGCAACAGCTTCATCGGGATTGACTCCAGTACAGAG 4355 Query 183308 TTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACC 183367 ||| || || || || || | ||| | || || | | ||||||||| ||| || || Sbjct 4354 TTCCTTTCCTCCGAAGAAGTCAGCAAGAAGTTTCTGTACTCTTGGAATTCGAGTAGATCC 4295 Query 183368 ACCGACTAATACTACTTCATCGAT--ATTACTTTTACTAATTTGTGAATCTTTTAAAACT 183425 || || ||||| || || | || || | || | | || | | |||| | | Sbjct 4294 TCCAACCAATACGACGTCTTGAATCGATGATTTGTCC--ATCTTAGCATCTCGAAGGGCC 4237 Query 183426 TTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCT 183485 || || || || |||| || || | |||| ||| ||| || ||||| |||| ||| Sbjct 4236 TTCTCCACTGGTTCCAATGTCTTCCGGAATAGATCAGCACACAATTCTTCGAATCGAGCT 4177 Query 183486 CTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTT 183545 | || || | | | |||||| || | || | ||||||| ||||||| | | Sbjct 4176 CGTGTCAACTTGGCATGATAGTCAACTCCTTCATGAAGTGAATCAACTTCAATCACAGCT 4117 Query 183546 TGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAAT 183605 | | | |||||||| |||||| || |||| ||||||||| ||||| | || || | Sbjct 4116 TCAGCACTTGATGATAGTGTTCTCTTCGCTCTTTCACATGCAGTTCTCAATCTTCGAAGA 4057 Query 183606 GATCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGT 183665 | | | ||| || | ||||| | | | || || || || |||| || | ||||| Sbjct 4056 GCACGAGCATTTCCTTTGATATCCTTTCCACTCTTCCTCTTGAAATCAGCAAGACAATGT 3997 Query 183666 TGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTA 183725 | |||| |||| ||| |||||||| || || ||||| ||||| || || || | | Sbjct 3996 TCGAGTACTCTTTGATCGAAATCTTCTCCTCCCAAATGAGTATCTCCTGCTGTTGATCGT 3937 Query 183726 ACTTCAAATA---TTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCC 183782 ||||| || | ||| || || ||| ||| |||||||| ||||| || || || Sbjct 3936 ACTTCGAAGAGAGATCCTTCCGAGATTGTTAGAATCGATACATCGAATGTTCCTCCTCCA 3877 Query 183783 AAATCAAA 183790 | |||||| Sbjct 3876 AGATCAAA 3869 Score = 134 bits (148), Expect = 4e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || |||||||||||| | || || |||||||| ||||||| || | || |||| || Sbjct 2828 GCAATAGGAATCGATCTGGGGACGACTTATTCGTGTGTTGGAGTCTACCAGAATGGACGA 2887 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| || || || |||||||| |||| || || || || ||||||||||| ||| Sbjct 2888 GTTGAAATCATCGCGAACGATCAAGGAAACAAGACCACTCCTTCCTACGTTGCATTCACC 2947 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||| || | ||||||| ||||| || |||||||||| |||||| ||| Sbjct 2948 GATGATGAACGACTTGTTGGTGACTCTGCCAAGGATCAAGCTGCAAGGAATCCAGTCAAT 3007 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG 349410 || | || ||||||||| |||| || || || Sbjct 3008 ACTATCTTCGATGCTAAGAGACTCATCGGAAG 3039 >seq9234 Length=18122 Score = 271 bits (300), Expect = 2e-67 Identities = 696/1046 (67%), Gaps = 19/1046 (2%) Strand=Plus/Minus Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 || || || ||||| ||||| || || || || ||| | || || ||||| |||||| Sbjct 5814 GAAGCCGTGATTACCGTACCTGCATACTTCAACGATTCTCAACGACAAGCAACGAAAGAT 5755 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 || | | ||| | || | || |||| | || || ||||||||||| ||||| ||| Sbjct 5754 GCAGCAACCATCTCTGGTCTCAAGTGTCTACGTATCATCAATGAACCCACAGCTGCTGCA 5695 Query 349727 ATTGCATATGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTT 349785 | |||||||| | || || ||| | | || | |||| | || || |||||| | Sbjct 5694 TTGGCATATGGATTGGACAAGAATCTATCTGGA-GAGAGAAATGTGCTGATCTTTGATCT 5636 Query 349786 AGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTT---GAAGT 349842 || || || || || |||||||| | |||||| | || ||| | ||||| Sbjct 5635 CGGAGGAGGAACATTCGATGTATCGATTCTAACAATCTCGGAAGGATCTCGGAACGAAGT 5576 Query 349843 TAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT--AATCGT-CTCGT 349899 | |||| || || ||||| ||| | || ||||||||||| ||| || || |||| Sbjct 5575 ACGATCAACAGCAGGAGATACTCATTTGGGAGGAGAAGATTTCGATCAAAGAGTACTCGA 5516 Query 349900 TTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAG 349959 || | | || || || ||| | | | || ||||| || ||| || | Sbjct 5515 A---CACTGTCTTGCTGATTTCAAGAGGAAGAGTGGAAAGGATATCAAAGGAAATGCTCG 5459 Query 349960 AGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTAC 350019 || | || | | |||||||| |||||| | || ||| | | |||||||| | | | Sbjct 5458 TGCTCTTCGAAGATTGAGAACTGCATGTGAAAGAGCGAAGAGAACATTATCATCAAGTGC 5399 Query 350020 CCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATT-TCTTTTCATCTATTA 350078 || | |||||| ||||||| ||| ||| || || | || | || | | | Sbjct 5398 TGAAGCTGTGATTGAAGTTGATTCACTTCATGAAGGAGTTGACTATCATGCCAAGT-TGA 5340 Query 350079 CACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGG 350138 |||| ||||| || |||||||| ||| ||||| || | ||| |||| || |||| Sbjct 5339 CACGAGCTCGATTCGAAGAATTGTGTGCTGATCTATTCCGGAAGACATTGGAACCAGTGG 5280 Query 350139 AAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCA--GATTGATGAAGTAGTTTTAGT 350196 | || | | |||||| || ||| | |||||| |||| | || || || || || Sbjct 5279 AGAAGGCCCTTCGAGATGCTAAGATGA--ATAAATCATCGATTCAAGACGTCGTATTGGT 5222 Query 350197 TGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAA 350256 ||| || ||||| || ||||||| ||| || || | || |||| || ||| || || Sbjct 5221 TGGAGGATCTACTCGAATTCCAAGAGTACAGAAGCTTCTTGCTGACTTCTTTGGAGGAAA 5162 Query 350257 AGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 |||| | || ||| ||||| |||||||||||||| ||||| ||||| || || || Sbjct 5161 GGAACTCTGTACTGGAATCAATCCCGATGAAGCTGTTGCCTATGGAGCTGCAGTACAAGC 5102 Query 350317 ATCTATTTTATCTGGAAAT-AAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAA 350375 || || |||| ||| | |||| | | | | | | ||| | |||| | ||||| Sbjct 5101 TGCTGTTCTATCAGGAGTTCAAGACT-CAACAGTCAAAGATGTTCTACTCGTTGATGTTG 5043 Query 350376 CTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAA 350435 |||||||||| | ||| | || ||| |||| | ||| ||||| ||| | ||| | Sbjct 5042 CTCCACTTTCATTGGGAATCGAGACTGCTGGAGGAGTTATGACATCACTTGTCGATAGGA 4983 Query 350436 ATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAG 350495 ||| | | | ||||| | | || || || || | ||| |||||||| || | Sbjct 4982 ATACTCGTATTCCTACTCGAGCTATGAAGACATTCTCCACTTATGCTGATAATCAACCTG 4923 Query 350496 CGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTG 350555 ||| | |||||||| || ||||| ||||| |||| || || |||||| || |||||| Sbjct 4922 GAGTATCCATTCAAGTCTTCGAAGGAGAACGAGCTCTTACCAAGGATAATCATCAACTTG 4863 Query 350556 GAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCT 350615 || | || || || |||||| || || |||||||| ||||||||||||||| Sbjct 4862 GAAACTTCGAACTGTCTGGAATTCCTCCTGCTCCAAGAGGAGTCCCTCAGATTGAAGTCG 4803 Query 350616 CTTTCGATATTGATTCAAATGGTATT 350641 ||||| |||||| | ||||| ||| Sbjct 4802 TATTCGAGATTGATGCTAATGGAATT 4777 Score = 194 bits (214), Expect = 5e-44 Identities = 597/914 (65%), Gaps = 31/914 (3%) Strand=Plus/Plus Query 182894 TCCAGTTGATTTTTCAAGTGCGCTAACATTTAAAATACCATTAGAGTCAACATCAAATGA 182953 ||||||||| || || || | ||| | ||| ||||||| |||| || ||| Sbjct 4744 TCCAGTTGACTTATCCGTAGCAGTCACAGCCAGAATTCCATTAGCATCAATCTCGAATAC 4803 Query 182954 TACTTCAATCTGTGGAACACCTCGTGGCATTGGTGGAATTCCAGTTAAAGTA--AATTCA 183011 ||||||||||| || || |||| ||| || |||||||||| | ||| || | Sbjct 4804 GACTTCAATCTGAGGGACTCCTCTTGGAGCAGGAGGAATTCCAG--ACAGTTCGAAGTTT 4861 Query 183012 CCTAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCCTTCATATACTTGAATAGTAACT 183071 || | || || |||||| || || |||| || ||||| | |||||||| | ||| Sbjct 4862 CCAAGTTGATGATTATCCTTGGTAAGAGCTCGTTCTCCTTCGAAGACTTGAATGGATACT 4921 Query 183072 GCTGGCTGATTATCACTATAAGTAGAAAAAACTTGCTTTTTATT---AATAGGAATAGTT 183128 | || ||||||||| |||||| || || | ||| || | |||||||| Sbjct 4922 CCAGGTTGATTATCAGCATAAGTGGAGAA---TGTCTTCATAGCTCGAGTAGGAATACGA 4978 Query 183129 GAATTTCGCGGAACAATTACAGTCATTACTTCTCTGGCAGTTTCTAATCCTAATGATAAT 183188 | ||| | |||| | ||||| ||| ||| ||||| || | ||| ||||| | | Sbjct 4979 GTATTCCTATCGACAAGTGATGTCATAACTCCTCCAGCAGTCTCGATTCCCAATGAAAGT 5038 Query 183189 GGTGCTACATCTAGTAATAATAAATCT--GA-TGTTTTATCTGATTTAATATCACTTAAA 183245 || || ||||| | | || | |||| || |||| ||| | || | || | Sbjct 5039 GGAGCAACATCAACGAGTAGAACATCTTTGACTGTTGAGTCT---TGAACTCCTGATAGA 5095 Query 183246 ATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGAT 183305 | |||||||| || || || ||||| |||||||||||||| || || ||| | | | Sbjct 5096 ACAGCAGCTTGTACTGCAGCTCCATAGGCAACAGCTTCATCGGGATTGATTCCAGTACAG 5155 Query 183306 AATTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAA 183365 | ||| || || ||| || || | ||| | | || | | ||||||||| ||| || Sbjct 5156 AGTTCCTTTCCTCCAAAGAAGTCAGCAAGAAGCTTCTGTACTCTTGGAATTCGAGTAGAT 5215 Query 183366 CCACCGACTAATACTACTTCATCGAT--ATTACTTTTACTAATTTGTGAATCTTTTAAAA 183423 || || || ||||| || || | || || | |||| | || | | |||| | Sbjct 5216 CCTCCAACCAATACGACGTCTTGAATCGATGA--TTTATTCATCTTAGCATCTCGAAGGG 5273 Query 183424 CTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTG 183483 | || || || || |||| || || | |||| ||| ||| || ||||| |||| | Sbjct 5274 CCTTCTCCACTGGTTCCAATGTCTTCCGGAATAGATCAGCACACAATTCTTCGAATCGAG 5333 Query 183484 CTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATG 183543 ||| || || | | | |||||| || | || | ||||||| ||||||| | Sbjct 5334 CTCGTGTCAACTTGGCATGATAGTCAACTCCTTCATGAAGTGAATCAACTTCAATCACAG 5393 Query 183544 TTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTA 183603 || | | ||||||||||||||| || |||| ||||||||| ||||| | || || | Sbjct 5394 CTTCAGCACTTGATGATAATGTTCTCTTCGCTCTTTCACATGCAGTTCTCAATCTTCGAA 5453 Query 183604 ATGATCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAAT 183663 | | | ||| || | ||||| | | | || || || || |||| || | | | Sbjct 5454 GAGCACGAGCATTTCCTTTGATATCCTTTCCACTCTTCCTCTTGAAATCAGCAAGACAGT 5513 Query 183664 GTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTT 183723 ||| |||| |||| ||| |||||||| || || ||||| ||||| || || || | | Sbjct 5514 GTTCGAGTACTCTTTGATCGAAATCTTCTCCTCCCAAATGAGTATCTCCTGCTGTTGATC 5573 Query 183724 TAACTTCAAATATTCCG----TCTTC---AATATTTAAAATTGATACATCAAATGTACCA 183776 ||||| ||||| |||| || ||| ||| |||||||| ||||| || Sbjct 5574 GTACTTC----GTTCCGAGATCCTTCCGAGATTGTTAGAATCGATACATCGAATGTTCCT 5629 Query 183777 CCACCCAAATCAAA 183790 || || | |||||| Sbjct 5630 CCTCCGAGATCAAA 5643 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || |||||| | || || |||||||||||||||| || | || |||| || Sbjct 6660 GCAATCGGCATCGATCTGGGGACGACTTATTCTTGTGTTGGAGTCTACCAGAATGGACGA 6601 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| || || || |||||||| |||| || || || || ||||||||||| | Sbjct 6600 GTTGAAATCATCGCGAACGATCAAGGAAACAAGACCACTCCTTCCTACGTTGCATTCAAT 6541 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||| || | ||||||||||||| || |||||||||| |||||| ||| Sbjct 6540 GATGATGAACGACTTGTTGGTGATTCTGCCAAGGATCAAGCTGCAAGGAATCCAGTCAAT 6481 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG 349410 || | ||||||||||| |||| || || || Sbjct 6480 ACTATCTTTGATGCTAAAAGACTCATCGGAAG 6449 >seq11608 Length=23747 Score = 91.5 bits (100), Expect = 4e-13 Identities = 115/157 (73%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 140582 ATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTT 140641 || ||||| ||| || || || ||||| | | ||||||||||| || |||||||| || Sbjct 14712 ATATTCAA-TTGCTTACCGGCGAAGATCAATCTCTGCTGATCAGGGGGGATTCCTTCCTT 14654 Query 140642 ATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAAC 140701 ||||| || || || || || || ||||| | || || | || || ||||| || | Sbjct 14653 GTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGGAGGCCTCGACCTCAAGGGTGAT 14594 Query 140702 TGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||| ||||| || || || || || ||||||||| Sbjct 14593 GGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATT 14557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514987299477674