Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20pacificus_20[genbank_20GCA_5F000180635.2_202015-04- 03] 13,758 sequences; 133,113,749 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq9143 91.5 2e-13 >seq9143 Length=31746 Score = 91.5 bits (100), Expect = 2e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 59982 CGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATT 60041 ||||| || ||||| || ||||| || || ||||||||||| ||||||||| || || Sbjct 9571 CGTCTGATCGCTTTCGCGTGCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCGGCCATC 9512 Query 60042 TTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCC 60101 |||||||| || ||| | || |||||||| || || | | ||||| ||||| || || Sbjct 9511 TTCTGGCTGAAGAAGAGAGGACTCATGCCCGGACTCACTCATTCCAATGAGCTCATCTCG 9452 Query 60102 CGG 60104 ||| Sbjct 9451 CGG 9449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548430467447520