Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhabditophanes_20sp._20KR3021_20[genbank_20GCA_5F000944355.1_202014- 09-24] 471 sequences; 47,267,908 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq37 179 6e-41 seq33 168 1e-37 seq42 163 4e-36 seq284 152 8e-33 seq13 152 8e-33 seq135 149 1e-31 seq69 147 3e-31 seq44 113 7e-21 seq19 113 7e-21 seq94 109 9e-20 seq108 98.7 2e-16 seq34 98.7 2e-16 seq15 98.7 2e-16 >seq37 Length=373421 Score = 179 bits (198), Expect = 6e-41 Identities = 201/269 (75%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| || |||||||| | | ||||| |||||||||||||||||||| |||||||| || Sbjct 265162 CGCCAAACGTCATCGTAAAGTACTTCGTGATAACATCCAAGGAATCACTAAGCCAGCCAT 265103 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | ||||| ||||||||||||||||||||| | |||| ||| | || || ||||| | Sbjct 265102 CAGACGTCTAGCTCGTCGTGGTGGAGTCAAGAGAATCTCCGGACTTGTTTACGAAGAAAC 265043 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||||| |||| |||||| | | ||| || | ||| ||| | |||| ||| Sbjct 265042 TCGCGGAGTTTTAAAGACTTTCCTCGAAAACGTCATTCGTGACGCTGTTACCTATTGCGA 264983 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || |||||| | ||||| || || |||||||| |||||||||| | || | ||||| Sbjct 264982 ACATGCTAAAAGAAAGACCGTTACTGCCATGGATGTCGTCTATGCTCTTAAGAGACAAGG 264923 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 | |||| || || ||| |||||| Sbjct 264922 AAAAACTCTTTACGGATTCGGAGGTTAAT 264894 >seq33 Length=402748 Score = 168 bits (186), Expect = 1e-37 Identities = 188/250 (75%), Gaps = 6/250 (2%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| ||||| || ||||| |||||||||||||| ||| | |||||||||||||||||| Sbjct 122272 CTTCGTGATAATATTCAAGGTATCACCAAGCCAGCCATCAGACGTCTGGCTCGTCGTGGT 122213 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || ||||| | |||| || |||| |||||||| | ||| | ||||||||||| ||| Sbjct 122212 GGCGTCAAAAGAATCTCCGGCCTGGTTTATGAAGAAACTCGGGGTGTTTTGAAGACATTC 122153 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| | | || |||| |||||| | |||| |||||| || || | ||||| ||| Sbjct 122152 CTCGAAAATGTGATCCGTGATGCCGTAACCTATTGCGAGCATGCCAAGAGAAAGACAGTC 122093 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGA---TTTATGGTTTT 16690 || | |||||| | |||||||| | || | |||||| |||| | ||||| || Sbjct 122092 ACAGCGATGGATGTTGTCTATGCTCTCAAGAGACAAGGC---AAGACTCTATATGGGTTC 122036 Query 16691 GGAAGTTAAT 16700 ||| |||||| Sbjct 122035 GGAGGTTAAT 122026 >seq42 Length=343515 Score = 163 bits (180), Expect = 4e-36 Identities = 199/270 (74%), Gaps = 6/270 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || || |||||| | | | |||||| ||||| ||||||||||||||||||||||| ||| Sbjct 131859 GCCAAACGTCATAGGAAAGTTCTTCGCGATAATATCCAAGGAATCACCAAGCCAGCCATC 131800 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 | ||| | ||||||||||| || ||||| | | |||||| | ||||||||||| | Sbjct 131799 AGACGTTTAGCTCGTCGTGGAGGGGTCAAAAGAATATCTGGACTTGTCTATGAAGAAACC 131740 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || ||| | |||| |||||| | | ||||||| |||||| | ||| ||| Sbjct 131739 CGCAGTGTCCTCAAGACCTTCCTGGAAAATGTTATCCGTGATGCGGTAACCTACTGTGAG 131680 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| |||||||||||||| ||| | ||||| | || ||||| | ||| | |||| Sbjct 131679 CACGCAAAACGTAAGACTGTAACCGCTATGGACGTTGTTTATGCCCTCAAAAGACAAG-- 131622 Query 16673 CGTAAGA---TTTATGGTTTTGGAAGTTAA 16699 | |||| |||| || |||||| ||||| Sbjct 131621 -GAAAGACTCTTTACGGATTTGGAGGTTAA 131593 >seq284 Length=4515 Score = 152 bits (168), Expect = 8e-33 Identities = 196/269 (73%), Gaps = 1/269 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| || |||||||| | | ||||| |||||||||||||||||||| ||||||||||| Sbjct 2218 CGCCAAACGTCATCGTAAAGTACTTCGTGATAACATCCAAGGAATCACTAAGCCAGCTAT 2159 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | ||| ||||||||||||||||||||||| | |||||||| | || | ||||| | Sbjct 2158 CAGACGTTTGGCTCGTCGTGGTGGAGTCAAGAGAATCTCTGGACTTGTTCACGAAGAAAC 2099 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | | ||| |||| ||||| | | | || | ||| ||| | |||| || Sbjct 2098 TCGCGGAG-TTTAAAGACTTTCCTTGAAAATATCATTCGTGACGCTGTTACCTATTGTGA 2040 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||||| |||||||| || | |||||| |||||||||| | || | ||||| Sbjct 2039 ACACGCTAAGAAAAAGACTGTTACTGCTATGGATGTCGTCTATGCTCTTAAGAGACAAGG 1980 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 | |||| || || ||| |||||| Sbjct 1979 AAAAACTCTTTACGGATTCGGAGGTTAAT 1951 Score = 145 bits (160), Expect = 1e-30 Identities = 168/225 (75%), Gaps = 1/225 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| || |||||||| | | ||||| |||||||||||||||||||| ||||||||||| Sbjct 1550 CGCCAAACGTCATCGTAAAGTACTTCGTGATAACATCCAAGGAATCACTAAGCCAGCTAT 1491 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | ||| ||||||||||||||||||||||| | |||||||| | || | ||||| | Sbjct 1490 CAGACGTTTGGCTCGTCGTGGTGGAGTCAAGAGAATCTCTGGACTTGTTCACGAAGAAAC 1431 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | | ||| |||| ||||| | | | || | ||| ||| | |||| || Sbjct 1430 TCGCGGAG-TTTAAAGACTTTCCTTGAAAATATCATTCGTGACGCTGTTACCTATTGTGA 1372 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656 |||||||| |||||||| || | |||||| | |||||||| Sbjct 1371 ACACGCTAAGAAAAAGACTGTTACTGCTATGGATGTTGTCTATGC 1327 Score = 143 bits (158), Expect = 4e-30 Identities = 194/269 (72%), Gaps = 1/269 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| || |||||||| | | ||||| |||||||||||||||||||| ||||||||||| Sbjct 1073 CGCCAAACGTCATCGTAAAGTACTTCGTGATAACATCCAAGGAATCACTAAGCCAGCTAT 1014 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | ||| ||||||||||||||||||||||| | |||||||| | || | ||||| | Sbjct 1013 CAGACGTTTGGCTCGTCGTGGTGGAGTCAAGAGAATCTCTGGACTTGTTCACGAAGAAAC 954 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | | ||| |||| ||||| | | | || | ||| ||| | |||| || Sbjct 953 TCGCGGAG-TTTAAAGACTTTCCTTGAAAATATCATTCGTGACGCTGTTACCTATTGTGA 895 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||||| |||||||| || | |||||| | | |||||| | || | ||||| Sbjct 894 ACACGCTAAGAAAAAGACTGTTACTGCTATGGATGTTGCCTATGCTCTCAAGAGACAAGG 835 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 | |||| || || ||| |||||| Sbjct 834 AAAAACTCTTTACGGATTCGGAGGTTAAT 806 Score = 143 bits (158), Expect = 4e-30 Identities = 194/269 (72%), Gaps = 1/269 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| || |||||||| | | ||||| |||||||||||||||||||| ||||||||||| Sbjct 3059 CGCCAAACGTCATCGTAAAGTACTTCGTGATAACATCCAAGGAATCACTAAGCCAGCTAT 3000 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | ||| ||||||||||||||||||||||| | |||||||| | || | ||||| | Sbjct 2999 CAGACGTTTGGCTCGTCGTGGTGGAGTCAAGAGAATCTCTGGACTTGTTCACGAAGAAAC 2940 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | | ||| |||| ||||| | | | || | ||| ||| | |||| || Sbjct 2939 TCGCGGAG-TTTAAAGACTTTCCTTGAAAATATCATTCGTGACGCTGTTACCTATTGTGA 2881 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||||| |||||||| || | |||||| | | |||||| | || | ||||| Sbjct 2880 ACACGCTAAGAAAAAGACTGTTACTGCTATGGATGTTGCCTATGCTCTCAAGAGACAAGG 2821 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 | |||| || || ||| |||||| Sbjct 2820 AAAAACTCTTTACGGATTCGGAGGTTAAT 2792 >seq13 Length=696343 Score = 152 bits (168), Expect = 8e-33 Identities = 183/249 (73%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || |||||||||||||| ||||| ||||| |||||| | || || ||||||||||| Sbjct 533006 CTCCGTGATAACATCCAAGGTATCACAAAGCCCGCTATCAGACGCCTTGCTCGTCGTGGA 533065 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 |||||||| || ||||||||||| | |||||||| | ||| | ||| | |||| ||| Sbjct 533066 GGAGTCAAACGAATCTCTGGATTGATTTATGAAGAAACTCGCGGTGTCCTCAAGACTTTC 533125 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | | | ||| ||| ||| | || ||| ||| ||||| ||| | ||||| ||| Sbjct 533126 TTAGAAAATGTTGTCCGTGACTCAGTCACCTACTGCGAACACGCCAAAAGAAAGACCGTC 533185 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 || | |||||| |||| ||||| | || | ||||| | | || |||||||| ||| Sbjct 533186 ACAGCTATGGATGTCGTTTATGCTCTCAAGAGACAAGGAAGAACCATCTATGGTTTCGGA 533245 Query 16694 AGTTAATCT 16702 ||||| || Sbjct 533246 GGTTAAGCT 533254 >seq135 Length=42941 Score = 149 bits (164), Expect = 1e-31 Identities = 195/269 (72%), Gaps = 1/269 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| || |||||||| | | ||||| |||||||||||||||||||| ||||||||||| Sbjct 15413 CGCCAAACGTCATCGTAAAGTACTTCGTGATAACATCCAAGGAATCACTAAGCCAGCTAT 15472 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | ||| ||||||||||||||||||||||| | |||||||| | || | ||||| | Sbjct 15473 CAGACGTTTGGCTCGTCGTGGTGGAGTCAAGAGAATCTCTGGACTTGTTCACGAAGAAAC 15532 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | | ||| |||| ||||| | | | || | ||| ||| | |||| || Sbjct 15533 TCGCGGAG-TTTAAAGACTTTCCTTGAAAATATCATTCGTGACGCTGTTACCTATTGTGA 15591 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||||| |||||||| || | |||||| | |||||||| | || | ||||| Sbjct 15592 ACACGCTAAGAAAAAGACTGTTACTGCTATGGATGTTGTCTATGCTCTCAAGAGACAAGG 15651 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 | |||| || || ||| |||||| Sbjct 15652 AAAAACTCTTTACGGATTCGGAGGTTAAT 15680 >seq69 Length=158885 Score = 147 bits (162), Expect = 3e-31 Identities = 169/225 (75%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || || || ||||| | | || ||||| |||||||||||||| ||||||||||||||||| Sbjct 105995 GCAAAACGCCATCGTAAGGTC-CTTCGTGATAACATCCAAGGCATCACCAAGCCAGCTAT 105937 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | ||| | || |||||||| ||||||||| | |||| ||||| || |||||||| | Sbjct 105936 TAGACGTTTAGCCCGTCGTGGAGGAGTCAAGAGAATCTCCGGATTAGTTTATGAAGAAAC 105877 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| ||| |||||| |||||| | | ||||| | |||||| | ||| || Sbjct 105876 TCGTGGTGTCCTGAAGACCTTCCTTGAAAATGTTATTCGCGATGCTGTTACTTATTGTGA 105817 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656 |||||||| | || || || || | |||||| ||||||| || Sbjct 105816 ACACGCTAAGAGAAAAACCGTTACTGCTATGGATGTCGTCTACGC 105772 >seq44 Length=321098 Score = 113 bits (124), Expect = 7e-21 Identities = 183/261 (70%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | ||||| || ||||||||||||||||| |||||||| ||| Sbjct 2991 GCCAAGCGTCATCGCAAAGTCCTTCGTGACAACATCCAAGGAATCACGAAGCCAGCCATC 3050 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 | ||| |||| || ||||| ||||||| |||| || | || || ||||| | | Sbjct 3051 AGACGTTTGGCCCGCCGTGGAGGAGTCACAACAATCTCCGGCCTCGTTTACGAAGAAACT 3110 Query 16553 CGTGATGTTTTGAAGATCTTCCT-CAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | || | |||| | |||| ||| | | ||| || || ||| || Sbjct 3111 CGCGGAGTCCTCAAAACCTTCTTGGAAGA-TGTTGTTCGTGACTCTGTCACCTACTGTGA 3169 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| ||| | |||||||| || |||||||| | || || || | || | || || Sbjct 3170 ACACGCCAAAAGGAAGACTGTTACTGCCATGGATGTAGTTTACGCCCTCAAGAGACAGGG 3229 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 | | | |||||||| || || Sbjct 3230 CAGGACTATTTATGGATTCGG 3250 Score = 113 bits (124), Expect = 7e-21 Identities = 183/261 (70%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | ||||| || ||||||||||||||||| |||||||| ||| Sbjct 24511 GCCAAGCGTCATCGCAAAGTCCTTCGTGACAACATCCAAGGAATCACGAAGCCAGCCATC 24452 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 | ||| |||| || ||||| ||||||| |||| || | || || ||||| | | Sbjct 24451 AGACGTTTGGCCCGCCGTGGAGGAGTCACAACAATCTCCGGCCTCGTTTACGAAGAAACT 24392 Query 16553 CGTGATGTTTTGAAGATCTTCCT-CAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | || | |||| | |||| ||| | | ||| || || ||| || Sbjct 24391 CGCGGAGTCCTCAAAACCTTCTTGGAAGA-TGTTGTTCGTGACTCTGTCACCTACTGTGA 24333 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| ||| | |||||||| || |||||||| | || || || | || | || || Sbjct 24332 ACACGCCAAAAGGAAGACTGTTACTGCCATGGATGTAGTTTACGCCCTCAAGAGACAGGG 24273 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 | | | |||||||| || || Sbjct 24272 CAGGACTATTTATGGATTCGG 24252 Score = 100 bits (110), Expect = 4e-17 Identities = 181/261 (69%), Gaps = 3/261 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | |||| || ||||||||||||||||| |||||||| ||| Sbjct 2526 GCCAAGCGTCATCGCAAAGTCCTTCT-GACAACATCCAAGGAATCACGAAGCCAGCCATC 2584 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 | ||| |||| || ||||| ||||||| |||| || | || || ||||| | | Sbjct 2585 AGACGTTTGGCCCGCCGTGGAGGAGTCACAACAATCTCCGGCCTCGTTTACGAAGAAACT 2644 Query 16553 CGTGATGTTTTGAAGATCTTCCT-CAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || || || | ||| | |||| ||| | ||| || || ||| || Sbjct 2645 CGCGGAGTCTTCAAAACCTTGTTGGAAGA-TGTTGTTTGTGACTCTATCACCTACTGTGA 2703 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| ||| | |||||||| || |||||||| | || || || | || | || || Sbjct 2704 ACACGCCAAAAGGAAGACTGTTACTGCCATGGATGTAGTTTACGCCCTCAAGAGACAGGG 2763 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 | | | |||||||| || || Sbjct 2764 CAGGACTATTTATGGATTCGG 2784 Score = 100 bits (110), Expect = 4e-17 Identities = 181/261 (69%), Gaps = 3/261 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | |||| || ||||||||||||||||| |||||||| ||| Sbjct 24976 GCCAAGCGTCATCGCAAAGTCCTTCT-GACAACATCCAAGGAATCACGAAGCCAGCCATC 24918 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 | ||| |||| || ||||| ||||||| |||| || | || || ||||| | | Sbjct 24917 AGACGTTTGGCCCGCCGTGGAGGAGTCACAACAATCTCCGGCCTCGTTTACGAAGAAACT 24858 Query 16553 CGTGATGTTTTGAAGATCTTCCT-CAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || || || | ||| | |||| ||| | ||| || || ||| || Sbjct 24857 CGCGGAGTCTTCAAAACCTTGTTGGAAGA-TGTTGTTTGTGACTCTATCACCTACTGTGA 24799 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| ||| | |||||||| || |||||||| | || || || | || | || || Sbjct 24798 ACACGCCAAAAGGAAGACTGTTACTGCCATGGATGTAGTTTACGCCCTCAAGAGACAGGG 24739 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 | | | |||||||| || || Sbjct 24738 CAGGACTATTTATGGATTCGG 24718 Score = 91.5 bits (100), Expect = 2e-14 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | ||||| || ||||||||||||||||| |||||||| ||| Sbjct 1890 GCCAAGCGTCATCGCAAAGTCCTTCGTGACAACATCCAAGGAATCACGAAGCCAGCCATC 1949 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCA 16520 | ||| |||| || ||||| ||||||| Sbjct 1950 AGACGTTTGGCCCGCCGTGGAGGAGTCA 1977 Score = 91.5 bits (100), Expect = 2e-14 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | ||||| || ||||||||||||||||| |||||||| ||| Sbjct 25612 GCCAAGCGTCATCGCAAAGTCCTTCGTGACAACATCCAAGGAATCACGAAGCCAGCCATC 25553 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCA 16520 | ||| |||| || ||||| ||||||| Sbjct 25552 AGACGTTTGGCCCGCCGTGGAGGAGTCA 25525 >seq19 Length=566756 Score = 113 bits (124), Expect = 7e-21 Identities = 175/250 (70%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| ||||| || || |||||||| || || || || | | |||||||||||||| Sbjct 376354 CTTCGTGATAATATACAGGGAATCACTAAACCCGCCATTAGAAGATTGGCTCGTCGTGGT 376413 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || ||||| | | || || | || || ||||||| |||| ||| ||||| | ||| Sbjct 376414 GGGGTCAAAAGAATTTCGGGGCTTGTGTACGAAGAGACACGTGGTGTCTTGAAAACTTTC 376473 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 || | | ||||||| |||||| | ||| ||| || || ||| | || ||||| Sbjct 376474 CTTGAAAATGTTATCCGCGATGCTGTTACTTATTGCGAACATGCAAAAAGGAAAACTGTG 376533 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 || | ||||| |||| ||||| | ||| | ||||| | | | |||||||| ||| Sbjct 376534 ACGGCAATGGACGTCGTTTATGCTCTTAAAAGACAAGGAAGAACTTTATATGGTTTCGGA 376593 Query 16694 AGTTAATCTT 16703 ||||| ||| Sbjct 376594 GGTTAAACTT 376603 >seq94 Length=93297 Score = 109 bits (120), Expect = 9e-20 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || |||||||||||||||||||| |||||||| ||| | | | | ||||||| ||||||| Sbjct 25648 CGTGATAACATCCAAGGAATCACTAAGCCAGCCATCAGACATTTAGCTCGTCTTGGTGGA 25707 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 |||||| | | || ||| | || || ||||| | ||| | ||||| |||| ||||| Sbjct 25708 GTCAAGAGAATGTCCGGACTTGTTTACGAAGAAAGTCGCGGAGTTTTAAAGACTTTCCTT 25767 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | ||| || | || |||| | |||| || || |||| | ||||| || || Sbjct 25768 TAAAACGTCATTCGTGGTGCTGTTACCTATTGTGAACATACTAAGAGAAAGACCGTTACT 25827 Query 16637 TCCATGGATATCGTCTATGC 16656 | ||| || |||||||| Sbjct 25828 ACTATGTATGCTGTCTATGC 25847 >seq108 Length=67188 Score = 98.7 bits (108), Expect = 2e-16 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 16436 AAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495 ||||||||||||| | ||||| | |||||||||||||| | | ||||||| |||| | Sbjct 66470 AAGCGTCATCGCAAAGTACTTCGTGTTAACATCCAAGGAACCCCTAAGCCAGGTATCAGA 66411 Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGA 16534 ||| | ||||||||||||||||||||| | |||| ||| Sbjct 66410 CGTTTAGCTCGTCGTGGTGGAGTCAAGAGAATCTCCGGA 66372 >seq34 Length=393842 Score = 98.7 bits (108), Expect = 2e-16 Identities = 165/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || ||||||||||| ||||| ||||| || ||| | ||||| ||||| ||||| Sbjct 192313 CTCCGCGACAACATCCAAGGCATCACTAAGCCTGCCATCAGACGTCTTGCTCGCCGTGGA 192372 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 ||||||| || ||||||| | |||||||||| | ||||| || | |||| ||| Sbjct 192373 GGAGTCAGACGAATCTCTGGCCTCATCTATGAAGAAACTCGTGGAGTCCTCAAGACTTTC 192432 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | | | || | | ||| | || ||| ||||| || || | ||||| ||| Sbjct 192433 TTGGAAAATGTCGTACGCGATTCCGTCACTTATTGTGAGCATGCCAAGAGAAAGACCGTC 192492 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | ||||| | || ||||| | ||| | ||||| | | || ||||| ||||| Sbjct 192493 ACTGCTATGGACGTTGTATATGCCCTAAAAAGACAAGGAAGGACCATCTATGGATTTGG 192551 >seq15 Length=643573 Score = 98.7 bits (108), Expect = 2e-16 Identities = 165/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || ||||||||||| || |||||||| || ||| | ||||| || || ||||| Sbjct 536837 CTCCGCGACAACATCCAAGGTATTACCAAGCCTGCCATCAGACGTCTTGCCCGCCGTGGA 536778 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 |||||||| | |||| || | |||||||||| | ||||| || | |||| ||| Sbjct 536777 GGAGTCAAAAGAATCTCCGGTCTCATCTATGAAGAAACTCGTGGAGTCCTCAAGACTTTC 536718 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | | | || | | ||| | || ||| ||||| || || | ||||| ||| Sbjct 536717 TTGGAAAATGTCGTGCGCGATTCAGTCACCTACTGTGAGCATGCCAAGAGAAAGACCGTC 536658 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || |||||||| | |||||||| | ||| | ||||| | | || ||||| || || Sbjct 536657 ACTTCCATGGACGTTGTCTATGCGCTCAAAAGACAAGGAAGAACAATCTATGGATTCGG 536599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074769361403