Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhabditophanes_20sp._20KR3021_20[genbank_20GCA_5F000944355.1_202014- 09-24] 471 sequences; 47,267,908 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq32 93.3 3e-14 >seq32 Length=411647 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAA 39587 ||||||||| || || || |||| |||| || |||| |||||||| || ||| |||| Sbjct 326253 TTCTTTTTGGATGTTGTAGTCGGACAAAGTACGCCCATCTTCCAATTGCTTTCCGGCAAA 326194 Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGT 39647 || | ||| || ||||| | ||| | ||||| ||||| || || ||| | ||| Sbjct 326193 GATAAGACGTTGTTGATCTGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCTTTGA-CGT 326135 Query 39648 CGCTACTG-TGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTA 39706 | | || |||| | | ||| || || | |||||||||||| || || | ||| || | Sbjct 326134 TGTCAATGGTGTCAGAGGCTTCGACTTCAAGAGTAATTGTTTTCCCGGTAAGAGTCTTAA 326075 Query 39707 CGAAGATCTGCAT 39719 |||| |||||||| Sbjct 326074 CGAAAATCTGCAT 326062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347367605989943