Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhabditophanes_20sp._20KR3021_20[genbank_20GCA_5F000944355.1_202014- 09-24] 471 sequences; 47,267,908 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq76 118 1e-21 seq13 91.5 2e-13 >seq76 Length=128862 Score = 118 bits (130), Expect = 1e-21 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 109501 TTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACAC 109560 ||||| |||||||| |||||||||||| ||||||||||| ||||| | | |||| | Sbjct 12515 TTCATTGACTGAGATTGATCGATGAATGCTCCACGATCAGCTGCCATATTTAAGATATCC 12574 Query 109561 TTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACG 109620 ||||| || ||||||||||| || ||||| | | ||| || |||| ||||| || | Sbjct 12575 TTTTGACTGATTTCCCAGACTGTTTTGTAAAGTTCCTTAATTTCATTTGGAATTTCGGCA 12634 Query 109621 ATGTTTTGAATAGAGCCACCAGC 109643 || ||||||||||| ||||| || Sbjct 12635 ATCTTTTGAATAGACCCACCTGC 12657 >seq13 Length=696343 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 109501 TTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACAC 109560 ||||| |||||||| |||||||||||| ||||||||||| ||||| | ||| Sbjct 649494 TTCATTGACTGAGATTGATCGATGAATGCTCCACGATCAGCTGCCATAATTAATATATCT 649553 Query 109561 TTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACG 109620 || || || |||||||| || || || || | | ||| || |||| ||||| || | Sbjct 649554 TTCTGACTGATTTCCCACACTGTTTTATAAAGTTCCTTAATTTCATTTGGAATTTCGGCA 649613 Query 109621 ATGTTTTGAATAGAGCCACCAGC 109643 || ||||||||||| ||||| || Sbjct 649614 ATCTTTTGAATAGACCCACCTGC 649636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972532403800