Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhabditophanes_20sp._20KR3021_20[genbank_20GCA_5F000944355.1_202014- 09-24] 471 sequences; 47,267,908 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq76 448 5e-121 seq13 432 4e-116 seq30 277 2e-69 seq108 239 5e-58 >seq76 Length=128862 Score = 448 bits (496), Expect = 5e-121 Identities = 1123/1705 (66%), Gaps = 35/1705 (2%) Strand=Plus/Plus Query 47124 TGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCC 47183 ||||| || ||||| || | |||||||||||||| ||| ||| || |||| || ||| Sbjct 12530 TGATCGATGAATGCTCCACGATCAGCTGCCATATTTAAGATATCCTTTTGACTGATTTCC 12589 Query 47184 CATACTGTTTTATAAATTTGTTTAATGTCTTCTGGGAGATTAGTA---TTTTGAATAGAT 47240 || |||||||| |||| || ||||| || | ||| | | | | ||||||||||| Sbjct 12590 CAGACTGTTTTGTAAAGTTCCTTAATTTCATTTGGAATTTCGGCAATCTTTTGAATAGAC 12649 Query 47241 CCTCCgttttctataattttgttttttaattcatttgaccaaagttttcgttcagttaat 47300 || || | |||| || | ||||| || | | ||| | || | | | || Sbjct 12650 CCACCTGCTGCTATCATCTCTGATTTTACTTTGTCAGTCCATAAATTAAGATT-GACAAG 12708 Query 47301 gtttttaaA-AGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATA 47359 || |||| | ||| | ||| ||||||||||| || ||||| ||| | ||| ||| Sbjct 12709 GTCATTAAGTAAATGTGAATTGACAATTTGAAAGTCGCCAGAGGTTACACGACGTGAATA 12768 Query 47360 TATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGC 47419 |||||| ||||||||| || ||| |||||| ||||||| ||||||||| ||||| || Sbjct 12769 CATATTAGATGTATATGGCTCAATACTTTCATTGTTTCCAAGAATTTGAGCGGTTGAAGC 12828 Query 47420 TGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNN 47479 ||| ||||| | ||||| | || |||||| || |||| | | || Sbjct 12829 TGTTGGCATAGGTGCAAGGAGCAAAGAATTTCTAACCCCATGTAATGCAATTCTTTCCTT 12888 Query 47480 NNNNNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAAT 47539 | ||||||||||||||||||||| ||||||||| | |||||||| ||||| Sbjct 12889 AAGCCGACCCCAATCCCAAAGATCTGATGGTGTAACATTCCACATGTCATATTGCAGAAT 12948 Query 47540 TCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTC 47599 ||||||| | || |||||| || ||| || || |||| || ||| | ||| Sbjct 12949 TCCTTTAGAAACAGGGGAACCAGCGTAGGTTGAGTATGGTCCGTCGCTTTCAGCCAATTC 13008 Query 47600 ACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCT 47659 |||| ||||||||| | || || ||| |||||||||||||||||| |||||| || | | Sbjct 13009 ACAAGATGCTTCCAACGAACCATGATAGATTGTTTCAAATATTTTTTTGTTTAAATCCTT 13068 Query 47660 TGCTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAAC 47719 ||| || || || |||| ||||| || | || || |||||||| || Sbjct 13069 TGCATCGGAAGAAGCAAATGGATATTTCATCAACATGAAAGCGTCCGCTAATCCTTGGAC 13128 Query 47720 ACCAATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTT 47779 ||| | |||||| ||||| || | | || ||| |||| ||| | || || | Sbjct 13129 ACCCAAACCAATAGGTCTGTGTTTCATGTTTGAATTTCTTGCTTGTGGGACCGGGTAATA 13188 Query 47780 GTTTATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTT 47839 ||| | ||| |||| |||||| | | | ||| | ||| Sbjct 13189 GTTGACATCAATAACTTTATTCAAGTTTCTAGTTACAACTTTGGCTACTTCATGAAGTTT 13248 Query 47840 ATTAAAATCAAACTT------------GTTATTTATAACAAACCTATTAAGTGCTATAGA 47887 ||||||||| || || | |||||| || | || | || || || Sbjct 13249 TGCAAAATCAAATTTCCTTGTATCGCCGTCAACTATAACGAATTTGTTTAAGGCAATTGA 13308 Query 47888 TGCTAGATTACATACAGCTACCTCATTTGG--ATTAGTATATTGTATTATTTCAGCACAT 47945 ||| | |||||| ||||| | ||| | || || ||||| || | ||||||| || Sbjct 13309 TGCCAAATTACAAACAGCAATCTCCTCGGGTGATGAGTAT--TGAACAATTTCAGTGCAG 13366 Query 47946 AGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCC 48005 || || ||||| ||||| || | |||||| ||||| | |||| || || ||| Sbjct 13367 AGGTTGGAGCATTTAATAGTTCCAAGATTTTGTTGATTGCTTTTTCTGTTGCAGGCATCC 13426 Query 48006 TTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACA 48065 || | | || |||| | ||| ||||| || ||| ||||| || ||| |||| Sbjct 13427 TTAAACAAAATGTAAGGAGCTCCTGTTTCAATTTGATTTTCAACAATCTTTTTGAAAACT 13486 Query 48066 GTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTT- 48124 || ||||| | | ||| | | | |||| ||| ||| || |||| | Sbjct 13487 TCTCTTGCCTTAACTTGAACTCGAAATCTGCCCTCATTTTCATATC--GTTCATAAAGTG 13544 Query 48125 -CTCAAATTCAT--CCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAA 48181 ||| ||||| | ||||| ||| || | |||| || |||||||| | || |||||||| Sbjct 13545 CCTCGAATTCCTGACCCCA-ACA-ATCAGCTAAGCCTGGACATTCGTGTGGGCACATCAA 13602 Query 48182 TGACCA-ATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTA 48240 ||||| || | |||| ||| |||| ||||||| | ||| || | ||| | | Sbjct 13603 AGACCACATAC-CATCGGTTTCAGCTCTTTTCATAAACAAATCAGGGACCCACAACCCGT 13661 Query 48241 TAAATAAATCCCTAGTTCTTAGTTCT-TCATTGCCACTATTCCTTTTAAGTTCAAGAAAG 48299 ||| || || | | | | | || || | ||| |||| | || | ||| | ||| Sbjct 13662 AAAACAAGTCACGCGCACG-ATTGCTATCTGTTCCATCATTCTTCTTTAATTCCAAAAAT 13720 Query 48300 TCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTA 48359 || | ||||||||||||||| ||||| | || || || | ||||||||| ||||||| Sbjct 13721 TCAAATATATCAGCATGCCAGGGTTCAAGGTAAATGGCAAAAGCACCTGGTCTTTTATTA 13780 Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 |||||||| | | |||||| || || |||||| | ||| | |||||| || | |||| Sbjct 13781 CCTCCTTGGTTGACATATCTTGCTGTGTTGTTAAATACTTGGAGCATTGGAACTAAACCA 13840 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGA 48478 || || | ||||| ||||| || | |||| |||||| ||| || | Sbjct 13841 TTAGAAACGCCATTCGTTCCATTTATGGCAGTTCCTTTAGCTCGAATACAGTGAACGTTC 13900 Query 48479 AATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538 ||| ||||| || |||||| ||| || |||| ||||| | | || ||| |||| Sbjct 13901 AAT-CCTATTCCTCCTGCCGATTTCGAAATTAAGGCACATTGAGATAAAGTGTCAAAAAT 13959 Query 48539 TCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACA 48598 ||||| || ||| || |||| | || | ||||||| | | | ||| ||| | Sbjct 13960 TCCTTTGATTGAATCCTCAGACATAGTCAACAAAAAACAAGAACATAATTGAGGAGTAGG 14019 Query 48599 AGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTT 48658 ||||||| ||||| | ||||||| ||||| |||||||||| || || | | || Sbjct 14020 GGTTCCTGCGTTAAAAAGAGTTGGAGTAGCATGCGTAAACCATTTTTCAGACATGTAATT 14079 Query 48659 ATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAA 48718 |||||||||||| ||| || || || || || ||||| | | |||||||||| Sbjct 14080 GTATGTTTCAATAGCAGCTTCAATGTCTTCTTTGTGAATACCAACTGCAACACGCATTAT 14139 Query 48719 CATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAA 48778 || ||| ||||||||||||| | | ||| ||||| | | ||||| || || Sbjct 14140 CAAATAACCTGGTCTTTCAACAACTACGCCATTGATTTTGAGCAAATATGCGCGCTCTAA 14199 Query 48779 TGTTTTAAAACCAAAATAGTTGTAT 48803 |||||| | |||||||| ||||| Sbjct 14200 TGTTTTGTATCCAAAATAAGTGTAT 14224 >seq13 Length=696343 Score = 432 bits (478), Expect = 4e-116 Identities = 1201/1839 (65%), Gaps = 39/1839 (2%) Strand=Plus/Plus Query 46982 AGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACCAGTCTTTAA 47041 |||||| |||||||| | |||| |||||| |||||| |||| ||||| ||||| Sbjct 649367 AGTAAATTTAATTGGGTCGACAGCTGGCCTTGTTCTTAAATAGTACACTCCAGTTTTTAA 649426 Query 47042 ACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAAT 47101 ||||| |||| | ||| || ||| || | |||| | ||||| | | Sbjct 649427 ACCTAGTTTCCAACTATAAAAGAACATTGATGTAGAATTAGGAAGCGAAGGTTTTTCTAC 649486 Query 47102 ATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAA 47161 | | ||| | || ||| ||||| || ||||| || | ||||||||||||| ||| Sbjct 649487 AAATAGATTCATTGACTGAGATTGATCGATGAATGCTCCACGATCAGCTGCCATAATTAA 649546 Query 47162 AATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGGGAG 47221 ||| | | || || ||||| ||||||||||||| || ||||| || | ||| | Sbjct 649547 TATATCTTTCTGACTGATTTCCCACACTGTTTTATAAAGTTCCTTAATTTCATTTGGAAT 649606 Query 47222 ATTAGTA---TTTTGAATAGATCCTCCgttttctataattttgttttttaattcatttga 47278 | | | ||||||||||| || || | |||| || | ||||| || | | Sbjct 649607 TTCGGCAATCTTTTGAATAGACCCACCTGCTGCTATCATCTCTGATTTTACTTTGTCAGT 649666 Query 47279 ccaaagttttcgttcagttaatgtttttaaA-AGATGAGGATTAACAATTTGAAATTCTC 47337 ||| | || | | | || || |||| | ||| | ||| ||||||||||| || | Sbjct 649667 CCATAAATTAAGATT-GACAAGGTCATTAAGTAAATGTGAATTGACAATTTGAAAGTCGC 649725 Query 47338 CAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTCATTATTTC 47397 |||| ||| | ||| ||| |||||| ||||||||| || ||| |||||| |||| Sbjct 649726 CAGAAGTTACACGACGTGAATACATATTAGATGTATATGGCTCAATACTTTCATTGTTTC 649785 Query 47398 CAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTC 47457 ||| ||||||||| ||||| ||||| ||||| | ||||| | || |||||| || | Sbjct 649786 CAAGAATTTGAGCGGTTGAAGCTGTTGGCATAGGTGCAAGGAGCAAAGAATTTCTAACCC 649845 Query 47458 CATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATGGAACAACAT 47517 ||| | | || | ||| ||||||||||| ||||| ||||| Sbjct 649846 CATGTAATGCAATTCTTTCCTTAAGCCGACCCCAGTCCCAAAGATCCGATGGTGTAACAT 649905 Query 47518 TCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATATGTTTTATAAG 47577 |||| | |||||||| |||||||||||| | || |||||| || ||| || | Sbjct 649906 TCCACATGTCATATTGCAGAATTCCTTTAGAAACAGGGGAACCAGCGTAGGTTGAGTATG 649965 Query 47578 GACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAA 47637 | |||| || || | ||||||| ||||||||| | | || ||| ||||| |||| Sbjct 649966 GTCCGTCGCTTTCGGCCAATTCACAAGATGCTTCCAACGAGCCATGATAGATTGTCTCAA 650025 Query 47638 ATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNA 47697 |||||||| |||||| || | |||| || || || |||| ||||| | Sbjct 650026 ATATTTTTTTGTTTAAATCCTTTGCATCAGAAGAAGCAAATGGATATTTCATCAACATGA 650085 Query 47698 ATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTTATTAGAAAACT 47757 | | || || |||||||| ||||| | |||||| ||||| || | | || ||| Sbjct 650086 AAGCGTCCGCTAATCCTTGGACACCCAAACCAATAGGTCTGTGTTTCATGTTTGAATTTC 650145 Query 47758 CAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGANNNNNNNNNNNNN 47817 |||| ||| | || || | ||| | ||| |||| |||||| | Sbjct 650146 TTGCTTGTGGGACCGGGTAATAGTTGACATCAATAACTTTATTCAAGTTTCTAGTTACAA 650205 Query 47818 NNNNNACAATTTCTCTTAATTTATTAAAATCAAACTT------------GTTATTTATAA 47865 | | ||| | ||| ||||||||| || || | | || Sbjct 650206 CTTTGGCTACTTCATGAAGTTTTACAAAATCAAATTTCCTTGTATCGCCGTCAACTGCAA 650265 Query 47866 CAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGG--ATTAGT 47923 | || | || | || || ||||| | |||||| ||||| | ||| | || || ||| Sbjct 650266 CGAATTTGTTTAAGGCAATTGATGCCAAATTACAAACAGCAATCTCCTCGGGTGATGAGT 650325 Query 47924 ATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATT 47983 || || | ||||||| || || || ||||| ||||| || | |||||| ||||| Sbjct 650326 AT--TGAACAATTTCAGTGCAGAGGTTGGAGCATTTAATAGTTCCAAGATTTTGTTGATT 650383 Query 47984 ATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGA 48043 | |||| || || ||||| | | || |||| | ||| ||||| || ||| Sbjct 650384 GCTTTTTCTGTTGCAGGCATCCTTAAACAAAATGTAAGGAGCTCCTGTTTCAATTTGATT 650443 Query 48044 TTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATG 48103 ||||| || ||| |||| || ||||| | | ||| | | | |||| Sbjct 650444 TTCAACAATCTTTTTGAAAACTTCTCTTGCCTTAACTTGAACTCGAAATCTGCCCTCATT 650503 Query 48104 TTCGTATTTAGTATATAACTT--CTCAAATTCAT--CCCCATACACATTATCTAACCCAG 48159 ||| ||| || |||| | ||| ||||| | ||||| ||| || | |||| || | Sbjct 650504 TTCATATC--GTTCATAAAGTGCCTCGAATTCTTGACCCCA-ACA-ATCAGCTAAGCCTG 650559 Query 48160 GACATTCATTAGGACACATCAATGACCA-ATCCTCATCATTTTTTACTCTAGTCATAAAT 48218 ||||||| | || |||||||| ||||| || | |||| ||| ||| ||||||| Sbjct 650560 GACATTCGTGTGGGCACATCAAAGACCACATAC-CATCGGTTTCAGTTCTTTTCATAAAC 650618 Query 48219 ATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCT-TCATTGCCACT 48277 | ||| || | ||| | | ||| || || | | | | | || || | ||| Sbjct 650619 AAATCAGGGACCCACAACCCGTAAAACAAGTCACGTGCACG-ATTGCTGTCTGTTCCATC 650677 Query 48278 ATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGC 48337 |||| |||| | ||| | ||| || | ||||||||||||||| ||||| | || || || Sbjct 650678 ATTCTTTTTTAATTCCAAAAATTCAAATATATCAGCATGCCAGGGTTCAAGGTAAATGGC 650737 Query 48338 CATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAAC 48397 | ||||||||| ||||||||||||||| || | |||||| || || |||||| | || Sbjct 650738 AAAAGCACCTGGTCTTTTATTACCTCCTTGGTCGACATATCTTGCTGTGTTGTTAAATAC 650797 Query 48398 TCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACT 48457 | | |||||| || | |||||| || | ||||| ||||| || | |||| | Sbjct 650798 TTGGAGCATTGGAACTAAACCATTAGAAACGCCATTCGTTCCATTTATGGCAGTTCCTTT 650857 Query 48458 AGCTCTTATATTACTAA-TTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCAC 48516 ||||| ||| || | ||| ||||| || |||||| ||| || |||| |||| Sbjct 650858 AGCTCGAATACAGTGAACGTTCAAT-CCTATTCCTCCTGCCGATTTCGAAATTAAGGCAC 650916 Query 48517 ACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAAC 48576 | | | || || ||||||||| || || || ||| | || | |||| Sbjct 650917 ATTGAGATAAAGTGTCGAAAATTCCTTTGATTGAGTCTTCAGACATTGTCAACAAGAAAC 650976 Query 48577 AACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAA 48636 || ||||| ||| ||| ||||||||| ||||| | || || | || || ||| Sbjct 650977 AAGAAGACAATTGAGGAGTTAAAGTTCCTGCGTTAAACAGAGTAGGTGTAGCGTGGGTAA 651036 Query 48637 ACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGT- 48695 ||||||| | || | | | ||||||||| || ||| |||||||| | || |||| Sbjct 651037 ACCATTTTTGAGACATAAGATCATATGTTTCGATTGCAGCATCTATAT--CGTTCATGTG 651094 Query 48696 -ATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTAT 48754 || || |||| ||||||||| ||| || ||||| ||||||| ||| ||| || Sbjct 651095 AATTCCAATAGCAACACGCATTGACAAGTACCCTGGTCTCTCAACAACTTTCCCATTAAT 651154 Query 48755 TTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAA 48793 ||| || | ||||||| |||| |||||||||||||| || Sbjct 651155 TTTAAATAAATATGATCTTTCTAATGTTTTAAAACCGAA 651193 >seq30 Length=447140 Score = 277 bits (306), Expect = 2e-69 Identities = 980/1530 (64%), Gaps = 44/1530 (3%) Strand=Plus/Plus Query 47310 AGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTT 47369 || |||| || |||||||| || ||||| ||| ||| | ||| || ||||| Sbjct 97600 AGGTGAGAGTTCACAATTTGGAAATCTCCTGATGATACACGACGAGAGTACATATTCGAA 97659 Query 47370 GTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATG 47429 || |||||||| || ||| || ||||| |||||||||||||| || || || ||||| Sbjct 97660 GTGTATGGTTCAATGCTTTCGTTGTTTCCCAAAATTTGAGCAGTCGAGGCGGTTGGCATT 97719 Query 47430 GATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTC 47489 | || | | ||| |||||||||||||| ||| |||| | Sbjct 97720 GGAGCTAAGAGTAATGAATTTCTTACTCCATGTTTAGCAATCTTTTCCTTGAGTGCAGCC 97779 Query 47490 CAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTT 47549 || ||||| || || || ||| |||||||| | ||| ||||| | |||||| || Sbjct 97780 CAGTCCCACAGTTCAGACGGAGTGACATTCCACATATCGTATTGCAAAATTCCCTTTGAA 97839 Query 47550 ATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCT 47609 | ||| || || | || ||| ||| || || | | || ||| ||||||||| ||| Sbjct 97840 ACCGGTGATCCTTCGTAAGTTGAATAGGGTCCATCTTTTTCAGCTAGTTCACAAGAAGCT 97899 Query 47610 TCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTT----GCTTC 47665 ||||| |||| || || || || ||||| || ||| |||| | || | || || || Sbjct 97900 TCCAAAGCACCATGGTAAATAGTCTCAAAGATCTTTTTGTTGACAT-CTTTAGCAGCATC 97958 Query 47666 TGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAAT 47725 || | || || || | ||| || |||||||| || || | Sbjct 97959 AGAAGTG---AATGGTAGTCTCAACAACATGAAAGCATCAGCTAATCCTTGGACCCCCAA 98015 Query 47726 ACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTAT 47785 ||||| || ||||| | |||| || |||||| || | || || | || | Sbjct 98016 GCCAATAGGCCTATGTCTCATATTTGAGTTTCTAGCTTCAGGAACAGGGTAATAATTGAC 98075 Query 47786 ATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAA 47845 ||| |||| ||| || | | ||| || | || | | Sbjct 98076 ATCAATAACTTTGTTCAAATTCTTCGTAATAACCTTAGCAACTTGATGAAGCTTGGGATA 98135 Query 47846 ATCAAA----CTTGTTA----TTTAT----AACAAACCTATTAAGTGCTATAGATGCTAG 47893 ||| | ||| || ||||| |||||| | || | || || || |||| Sbjct 98136 ATCCATTGTTCTTTTTGCATCTTTATCATTAACAAATTTGTTCAAGGCAATTGAAGCTAA 98195 Query 47894 ATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACC 47953 |||||| || || || |||| ||| || || || | ||||||| || | |||| Sbjct 98196 ATTACAAACTGCGACTTCATCAGGAGAAGAGTACTGAACAATTTCAGTGCACAAATTAGA 98255 Query 47954 ACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAG 48013 ||||||||||| || | |||||| || ||| | |||| || || || |||||||| Sbjct 98256 GCATTTGATAGTTCCAAGATTTTGTTGGTTACTTTTTCTGTTGCAAGCATCTTTGTAAAG 98315 Query 48014 CATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGC 48073 || | || |||| ||||| || ||| ||| || ||| ||| || || || Sbjct 98316 AATGTAGGGGTTTCCTGTTTCAATTTGACTTTCGGCTATCTTCTTCAAAAGAGCTCTTGC 98375 Query 48074 CTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTC 48133 | | | ||| | ||| || || |||| |||||| ||||| || ||||| Sbjct 98376 TCTGACTTGAACTCGATATTTCTTTTCGAGTTCATATTTAACGTATAAGGCTTCGAATTC 98435 Query 48134 AT--CCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCC 48191 | ||||| || || | || ||||| ||||||||||||||||| | ||||| Sbjct 98436 TTGTCCCCAG-CA-ATCGGCCAAGCCAGGGCATTCATTAGGACACATAAGGGACCACATG 98493 Query 48192 TCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCC 48251 || || ||| |||| ||||||| | || || ||||| || | ||| ||||| Sbjct 98494 TCGTCGGATTTGGCTCTTTTCATAAAAAGGTCAGGAATCCATAGCCCATAAAACAAATCA 98553 Query 48252 CTAGTTC--TTAGTTCTTCATTGCCACTATTCCTTT-TAAGTTCAAGAAAGTCCATTATA 48308 | | | |||| | ||| | ||| ||| || ||| | |||||| || | ||| Sbjct 98554 CGTGCACGATTAGAT--TCAGTTCCATCATTTTTTCGTAACTCTAAGAAA-TCGAAGATA 98610 Query 48309 TCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGA 48368 ||||||||||| ||||||| ||| || || | |||| |||| ||| || ||||||||| Sbjct 98611 TCAGCATGCCAAGGTTCTAGATAAATGGCAAAAGCACCAGGTCTTTTGTTGCCTCCTTGA 98670 Query 48369 TCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATA 48428 || | ||| | || ||||| || | || ||||| ||||||| |||||||| || Sbjct 98671 TCAACATACTTAGCGGTATTATTGAAGACCTGCAACATAGGGACAAGTCCATTTGAAATT 98730 Query 48429 CCATTGGTTCCCGAAATA--TAACTTCCACTAGCTCTTATATTACTAATTGAAAT----A 48482 ||||| ||||| |||| | || || ||||||| ||| ||| || || Sbjct 98731 CCATTAGTTCCATTAATAGCTGAC--CCCTTAGCTCTGATA----CAATGGACATTCAAG 98784 Query 48483 CCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCT 48542 || || |||||||| ||| || || | ||||| | | ||| || |||||||| Sbjct 98785 CCAATTCCACCTGCAGATTTTGAAATCAATGCACATTGAGACAAGGTGTCGAAAATTCCT 98844 Query 48543 TCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTT 48602 | || |||| |||| | | | ||| || ||||| ||| || ||| ||| Sbjct 98845 TTAATCGAATCAGAAGACATAGTCAGCAAAAAGCATGAAGACAGTTGAGGTGTACATGTT 98904 Query 48603 CCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATAT 48662 || | || || | || |||| || ||| ||||||||||||| || | ||| || || Sbjct 98905 CCGGCGTTGAAAAGAGTGGGAGTGGCGTGAGTAAACCATTTCTCAGACATCAAATTGTAG 98964 Query 48663 GTTTCAATAACAGAATCTATATC-CCATTGATGTATACCTATAGATACACGCATTAACAT 48721 ||||| ||| | || || || | ||| || || || | | |||||||| | ||| Sbjct 98965 GTTTCGATAGCGCCATTGATGTCATCCTTG-TGAATGCCAACGGCAACACGCATAATCAT 99023 Query 48722 ATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGT 48781 || | ||| ||||| || | ||| ||| || || || | || |||||||||||||| Sbjct 99024 ATGTCCAGGCCTTTCTACCACTTTTCCATTAATCTTGAATAAGTAAGATTTTTCCAATGT 99083 Query 48782 TTTAAAACCAAAATAGTTGTATGAAAAGTC 48811 || ||||| ||||| ||||| ||||| Sbjct 99084 CTTGAAACCGAAATAAGTGTATCCCAAGTC 99113 Score = 188 bits (208), Expect = 8e-43 Identities = 495/741 (67%), Gaps = 22/741 (3%) Strand=Plus/Plus Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728 || ||||||||| | |||||| |||| |||||||||||||| || | || || ||| Sbjct 100447 TTGTTGATATTCAGTTACTCTTCTTTCGAAGAAATTAGTTTTCCCTTGCAAGGAGATATT 100506 Query 18729 TTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAA--TCCTAATTCTAAT 18786 ||||||||| ||||| |||||||| || ||| ||||| | | ||| | || | Sbjct 100507 TTCCATAAACTCAAAAGGATTTTTAGTGTTGTAT-TTTTTGGGTAGTTCCAAGGTC-ATG 100564 Query 18787 AGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATT 18846 ||||| ||| || || ||| || ||| ||| | || ||||||||| | Sbjct 100565 AGTAGATGATCGGCAACGTATTCGATGTATTGAGACATAAGGTCGTGATTCATTCCGAG- 100623 Query 18847 AATTTAACA-GGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATAT 18905 || | || ||||| | || || | |||||| | ||| || | || || || || Sbjct 100624 AAGAGAGCATGGTAGAGACTCCGTCAAAAATTCCTTTTCGATTTCAACGGCTTCGCCAAT 100683 Query 18906 AATA-GATACAACTCTATCTTCATTAGGAGGGTA---TAGAAGATGTTTAAACATCAAAC 18961 ||| | || | || | | | | || || |||||| | | |||| | || Sbjct 100684 AATTTGGTATATCT-TGGCGGGAGTTGGTTTGTCATCTAGAAGGCGAT---ACATGAGAC 100739 Query 18962 ATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAAC 19021 | |||||||||| ||| || || |||||||| ||||| ||||| || ||||| Sbjct 100740 AGGCAAAATCACGATGGAGGCCTTCGTCTCTTGAAATCAACTCATTGGATTGACATAAAC 100799 Query 19022 CAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATA 19081 || | | ||| | | || | |||||| ||||||||||||||||| |||||||| | Sbjct 100800 CATGTAATTTGCCTTTGCTCTTCATCCAGAAGATAGAAGCAAATGATCCGGAAAAGAAAA 100859 Query 19082 TACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAA 19141 | || ||||| ||||||||||||| || || || || |||||| || | || || Sbjct 100860 TCCCCTCTACGGCTGCAAAAGCAATGCATCGCTCCCCGAAAGGAGCATCCTTGTCATTAA 100919 Query 19142 TCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAA 19201 ||||||||| ||||| |||||||| || || | |||||| |||| | || ||||| Sbjct 100920 TCCATTTCAAAGCCCAGTCAGCCTTTTTCTTGATACATGGGTAGTTCTCCAAAGCATTAA 100979 Query 19202 ATAGATACATACGC---TCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACA 19258 | | || || | || | || ||| ||| || || || |||| |||| Sbjct 100980 ACA---ACTTATCCTTTTCCTTTGCATCAGTAATGTAAGCCTCAATCAGCTTCGAATACA 101036 Query 19259 TTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTA 19318 | || ||||| || ||||| ||| || || || | ||||||| | || || | | Sbjct 101037 TCTCAGAATGGATGTTTTCAATAAAGATTTGGAACCGGTAAAAATAGAGAGCCTCGGGCA 101096 Query 19319 TCTGTACTTCACTACA-AAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCT 19377 | | |||||| | || || | ||| | |||||| | || ||||| ||||| || Sbjct 101097 TTTTAACTTCA-TCCATGAAGCGTTCTAGCAAATTGGCGTTGACTATGCCATCTGATGCA 101155 Query 19378 GCAAAAAATGCTAATACATGT 19398 |||||||| || ||||||||| Sbjct 101156 GCAAAAAAAGCCAATACATGT 101176 >seq108 Length=67188 Score = 239 bits (264), Expect = 5e-58 Identities = 961/1515 (63%), Gaps = 42/1515 (3%) Strand=Plus/Minus Query 47309 AAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTA---TATATATT 47365 |||||| ||| || |||||| | ||||| ||| ||| ||||| | || ||||| Sbjct 6925 AAGATGGCAATTTACGATTTGATAATCTCCTGATGATAC---ACGGCGAGAGTACATATT 6869 Query 47366 ACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGG 47425 || |||||||| || ||| || ||||| |||||||||||||| || || || || Sbjct 6868 CGAAGTGTATGGTTCAATGCTTTCGTTGTTTCCCAAAATTTGAGCAGTCGAGGCGGTCGG 6809 Query 47426 CATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNG 47485 ||| | || | | || |||||||||||||| ||| |||| Sbjct 6808 CATTGGAGCTAAGAGTAGTGAATTTCTTACTCCATGTTTAGCAATCTTTTCCTTGAGTGC 6749 Query 47486 TTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTT 47545 ||| ||||| || || || ||| |||||||| | ||| ||||| | || ||| || Sbjct 6748 AGCCCAGTCCCACAGTTCAGACGGAGTGACATTCCACATATCGTATTGCAAAACTCCCTT 6689 Query 47546 ACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACT 47605 | ||| || || | || ||| ||| || || | | || ||| ||||||||| Sbjct 6688 TGAAACCGGTGATCCTTCGTAAGTTGAATAGGGCCCATCTTTTTCAGCTAGTTCACAAGA 6629 Query 47606 TGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGAT---TCCTTGC 47662 |||||||| |||| || || || || ||||| || ||| |||| | || || || Sbjct 6628 AGCTTCCAAAGCACCATGGTAAATAGTCTCAAAGATCTTTTTGTTGACATCTTTCGCAGC 6569 Query 47663 TTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACC 47722 || || | || || || | ||| || |||||||| || || Sbjct 6568 ATCAGAAGTG---AATGGTAGTCTCAACAACATGAAAGCATCAGCTAATCCTTGGACCCC 6512 Query 47723 AATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTT 47782 | ||||| || ||||| | |||| || |||||| || | ||| || | || Sbjct 6511 CAAGCCAATAGGCCTATGTCTCATATTTGAGTTTCTAGCTTCAGGGACTGGGTAGTAATT 6452 Query 47783 TATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAA-TTTAT 47841 | || || | || || | | | || || | || ||| | Sbjct 6451 GACGTCGATGACCTTGTTCA-AGTTTCTTGTAATAACCTTAGAAACACTGTGAAGTTTCT 6393 Query 47842 TAAAATCAAACTTGTTATTT------------ATAACAAACCTATTAAGTGCTATAGATG 47889 | |||| | | | || ||| | ||||| | || | ||| ||||| | Sbjct 6392 TGTAATCTATCGTCTTCTTTCCTCCTTCTTCAACCACAAATTTGTTTAATGCAATAGAAG 6333 Query 47890 CTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGAT 47949 | | ||||| || || | |||| || || ||||||| ||||| | || | || Sbjct 6332 CCAAGTTACAAACGGCAATTTCATCGGGCGAAGAGTATTGTACGATTTCTGTGCACAAAT 6273 Query 47950 TACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGT 48009 | || || || || || | ||| || || || | |||| || || || ||| Sbjct 6272 TGGAGCACTTTATGGTTCCAAGATTCTGTTGGTTGCTTTTTCTGTTGCAAGCATCTTTGA 6213 Query 48010 AAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCC 48069 | || || |||| ||||| || || ||| |||||||||| ||| ||| | | Sbjct 6212 ATAGGATGTAAGGCATTCCAAGCTCCATTTGACATTCAATGATCTTCTTCAAAATATCTC 6153 Query 48070 TAGCCTTTA--TAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTC 48127 ||||||| | | ||| || || || ||| ||| || || | ||| || | || Sbjct 6152 TAGCCTTGACTTGGGAGCGATAC--TTCTTTTCAGTTTCATACTTGGCATACAAAGTTTC 6095 Query 48128 AAATTCATC-CCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACC 48186 || || || ||| ||| || | |||| ||||| |||||||||||||||||||| |||| Sbjct 6094 GAAGTCCTCTCCCCAACA-ATCAGCTAAGCCAGGGCATTCATTAGGACACATCAAAGACC 6036 Query 48187 AATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATA 48246 | ||| | | || |||| |||| || | ||| || ||||| || | ||| | Sbjct 6035 ACATTTCACCTTCCTTGGCTCTTTTCATGAAAAGATCCGGAATCCACAGCCCGTAAAACA 5976 Query 48247 AATCCCTAGTTC--TTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCAT 48304 | || | | | || | | || | ||| ||| | ||||| || ||||| ||||| Sbjct 5975 AGTCTCGTGCCCGATTGG--CATCTGTCCCATCATTTTTCTTAAGCTCCAGAAAATCCAT 5918 Query 48305 TATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCC 48364 |||||||||||||||||||||| ||| || || | |||| |||| ||| || ||||| Sbjct 5917 GATATCAGCATGCCATGGTTCTAGATAAATAGCAAAAGCACCAGGTCTTTTGTTTCCTCC 5858 Query 48365 TTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGA 48424 ||| || | ||| |||| ||| | || | ||| | |||||| |||| ||||| || Sbjct 5857 TTGGTCGACATACTTGGCGGTACTATTGAATACTTGGAGCATTGGAACAAGTCCATTCGA 5798 Query 48425 TATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAA--TTGAAATA 48482 || ||||| || || ||| || | ||||| || || | |||| Sbjct 5797 GATTCCATTAGTACCATTGATAGCGGAACCTTTGGCTCTGATTTTGTGGACGTTGAGT-- 5740 Query 48483 CCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCT 48542 || || || || || |||||| || ||||| | | || | || ||||| Sbjct 5739 CCGATTCCTCCAGCAGATTTAGAGATCTTGGCACATTGAGATAAAGTCTTGTAGATTCCA 5680 Query 48543 TCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTT 48602 || || |||||| || | |||| ||||| || | ||| ||| |||||| Sbjct 5679 TCAATTGAATCATCAGCAATGGTCAATAAGAAACAGGAGGAAAGTTGAGGAATACAAGTA 5620 Query 48603 CCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATAT 48662 || | ||||| | ||||| | |||||| | ||||||||||| || | ||| || || Sbjct 5619 CCAGCGTTAAAAAGGGTTGGCGTGGCATGAGTGAACCATTTCTCAGACATCAAGTTGTAA 5560 Query 48663 GTTTCAATAACAGAATCTATATCC-CATTGATGTATACCTATAGATACACGCATTAACAT 48721 || |||||| ||| | | |||||| | ||| || || || | || |||||||||| || Sbjct 5559 GTCTCAATAGCAGCACCAATATCCTCCTTG-TGAATGCCAACAGCAACACGCATTATCAA 5501 Query 48722 ATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGT 48781 || ||| |||||| ||| ||| ||| || || | | ||| ||| |||||| ||| Sbjct 5500 ATGCCCAGGCCTTTCAGCAACTTTTCCATTAATCTTAAGCAAATAAGATCTTTCCAGTGT 5441 Query 48782 TTTAAAACCAAAATA 48796 ||| | |||||||| Sbjct 5440 TTTGTACCCAAAATA 5426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562105490584440