Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhabditophanes_20sp._20KR3021_20[genbank_20GCA_5F000944355.1_202014- 09-24] 471 sequences; 47,267,908 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq7 257 1e-62 seq14 185 7e-41 seq42 156 3e-32 seq67 150 1e-30 seq27 131 1e-24 seq6 131 1e-24 seq78 89.7 4e-12 seq35 89.7 4e-12 seq30 89.7 4e-12 >seq7 Length=777966 Score = 257 bits (284), Expect = 1e-62 Identities = 849/1321 (64%), Gaps = 62/1321 (5%) Strand=Plus/Plus Query 281578 AGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAA 281636 |||| ||| ||||| || || | ||| |||||||||| | ||| | | || |||| Sbjct 251699 AGTACTTACTGTTTGGTTGTCAGCATAGGTTGTAAATATT-TGGCTAGTCTTTGTCGGAA 251757 Query 281637 TTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAG 281696 | || ||||| | | || | | ||||| || ||||| || ||||| | ||||||| Sbjct 251758 TCGTAGTGTTACGTTTGATCAAAGCAGTCATGATTCCACCTGCCGTTTCGATTCCAAGAG 251817 Query 281697 AAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAA 281756 |||| || | |||||| | || | | | ||| | |||| | | ||| | Sbjct 251818 AAAGTGGGGCGACATCGAGAAGAAGTAAGTCTTGGACAGCTTCAGACTTGTCGCCAGATA 251877 Query 281757 GAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCAT 281816 |||||||||||| | ||||| ||||| || || ||||| || ||||| | | || | Sbjct 251878 AAATAGCTGCTTGGACGGCAGCTCCATAGGCGACGGCTTCGTCTGGATTGATGGATTTGT 251937 Query 281817 TTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATG 281876 ||| | ||| ||| |||| || | |||| | || || ||||| | | | Sbjct 251938 TTAAGTCACGGCCAGAGAATAAATCGGACAAGAGTTTTTGGACTTTGGGAATTCTTGTAG 251997 Query 281877 ATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAA 281936 |||| ||||| || |||||||||| | || ||| ||| ||| | ||| || Sbjct 251998 ATCCACCAACCAAAACAATTTCATTAATTTGGCCTTTGTCCTTTTTAGCATCTCTCAATG 252057 Query 281937 CTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAG 281996 | ||||| ||||| || | ||| || | || | ||| |||||||||||| | Sbjct 252058 CCTTTTCGACGGGATCCATTGTGCTTCTGAAGAGATCAGCACATAGTTCTTCGAATCGGG 252117 Query 281997 CTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAG 282056 |||| |||| | || | | || || || || |||||||| || | ||| || | || Sbjct 252118 CTCTGGTAATATTGGTGTAGAAGTCGATGCCATCAAACAAAGAGTCTATTTCGATAGAAG 252177 Query 282057 TTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA 282116 |||||| || ||||| | | | || || | |||||| || || || ||||||| | Sbjct 252178 CTTGAGTAGAGGAAGACAACGTTCTCTTGGCTCTTTCACAGGCCGTTCTAAGTCTTCTCA 252237 Query 282117 AGGCTTTTGCTGATTGATT--CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACA 282174 | || || |||| | |||||| | || | || | |||||| || ||||| | Sbjct 252238 AAGCACGTG--GATTAGTGGACAAATCCTTCTTGTGCTTCCGCTTGAATTCCGCAACAAA 252295 Query 282175 CCATGTT--ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTA 282232 ||| | || | || || || || ||||| || || | | ||| | || | ||| Sbjct 252296 --ATGGTCTACCATTCGGTTGTCGAAGTCTTCCCCGCCAAGGTGAGTGTCGCCAGCCGTT 252353 Query 282233 G------------------CTCTTA-------------------------CTTGGAAAAG 282249 | || ||| ||| || | Sbjct 252354 GACAAAACTAAATTTATTACTATTAATATAAACAAGCCCACCAAATTTACCTTCAAATAT 252413 Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309 |||| |||| || | || || ||||||| || ||||| |||| |||||| || | Sbjct 252414 TCCACTGTCAATTGAAAGAATAGAAACATCAAAAGTACCACCTCCCAAATCAAAGATCAA 252473 Query 282310 TACATTCATTTCTTTGTCTTGGTTT----TTATCAAGACCATACGCAAAAGCAGCAGCAG 282365 ||| ||||| || | ||| || || | ||||| |||| ||||||||| | Sbjct 252474 AACAGCGGCCTCTTT-TCCTCCTTTATCCTTGTCCAAGCCATAAGCAATAGCAGCAGCTG 252532 Query 282366 TTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGG 282425 | |||||||| ||||||||||||||||| | ||| ||||| ||| ||||||||||||| Sbjct 252533 TAGGTTCATTGATAATTCTCAAAACATTCAAACCGGCAATAGCTCCCGCATCTTTAGTGG 252592 Query 282426 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTT 282485 |||||||||||||||| || || || || || || || || || || ||| | || || Sbjct 252593 CTTGTCTTTGTGAATCATTGAAGTAGGCTGGGACGGTGATGACAGCGTCTTTGACAGTTT 252652 Query 282486 TTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 282545 || | ||||| || |||| ||||||||| | | || ||| || ||||||| || Sbjct 252653 GCCCTAAGTAAGCTTCGGCCGTTTCTTTCATTTTGATAAGAACCATGGAGGAAATTTCTT 252712 Query 282546 CTGGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAA 282605 | ||| | ||| || || || | || ||||| | |||||| | ||| Sbjct 252713 CGGGACTAAATTCTTTTTTCTCCCCTTTAAATTCGACTTCGATCATTGGTTTGGTTCCAC 252772 Query 282606 CATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAAT 282665 | | || || || ||||||| ||||| || ||| || | || | || | Sbjct 252773 GGTCCAGGACCTTGAAAGGCCAATGCTTCATGTCATCTTGGACGGCACGATCGTCGAATT 252832 Query 282666 CTCTACCAATTAATCGTTTTGCATCAAAAA--TAGTATTGGTTGGATTAACTGCAGCTTG 282723 ||| |||||||||| || || ||||| | ||| ||| ||| || | || |||| Sbjct 252833 TTCTGCCAATTAATCTCTTGGCGTCAAAGACTGAGTTTTG--TGGGTTCATGGCGACTTG 252890 Query 282724 ATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGT 282783 | ||||| ||||| || | | |||||| || ||||| | || || || ||||| Sbjct 252891 GTTCTTGGCAGCATCACCGAGTAATCTTTCTGTGTCAGTAAAAGCTACGTAAGAAGGAGT 252950 Query 282784 TGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTAC 282843 || | || |||||||| || ||||| ||||||||||| |||| ||| | |||||| | Sbjct 252951 AGTTCTGTTTCCTTGATCGTTGGCAATGATTTCAACTTTTCCATGTTGGAAGACACCTGC 253010 Query 282844 A 282844 | Sbjct 253011 A 253011 Score = 87.8 bits (96), Expect = 1e-11 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 432277 AAAGATTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATA 432336 ||||||| | || ||||||||||| |||||||| ||| ||||||||||| | |||||| Sbjct 509575 AAAGATTAAAGGGAAAAGAAGGTCGGATTAGAGGGAATCTGATGGGAAAGAGAGTCGATT 509516 Query 432337 TGTCTGCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTC 432396 | || ||| | || || ||||| | ||||||||| | |||| | ||| || |||| Sbjct 509515 TTTCGGCAAGAACTGTCATTACGCCAGATCCTAATTTGCCTCTAGACACAGTGGGAGTTC 509456 Query 432397 C 432397 | Sbjct 509455 C 509455 >seq14 Length=692332 Score = 185 bits (204), Expect = 7e-41 Identities = 417/617 (68%), Gaps = 16/617 (3%) Strand=Plus/Minus Query 282236 CTTACTTGGAAA-AGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACC 282294 ||||| | ||| | |||||| || | ||| | | | |||||| ||| ||||| || Sbjct 340531 CTTACCTTCAAAGATTCCATCATCGATAGAAAGGATTGAAACATCGAAGGTACCACCTCC 340472 Query 282295 CATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTT--TTTATCAAGACCATACGCA 282352 | ||| || || || || ||| |||| |||||| ||| || | |||||| || Sbjct 340471 TAAATCGAAGATGAGGACGTTC--TTCTCACTCTTGGCGGCTTTGTCCAAACCATAAGCG 340414 Query 282353 AAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCT 282412 | || ||||||||||| || || |||||||| | |||||| || ||||| || ||| Sbjct 340413 ATGGCGGCAGCAGTTGGCTCGTTGATAATTCTAAGAACATTGAGTCCAGCGATGGCTCCG 340354 Query 282413 GCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCA 282472 ||||| || || ||||||||||| || ||||| || || || |||||||| | || || Sbjct 340353 GCATCCTTGGTAGCTTGTCTTTGGGAGTCGTTGAAGTAAGCTGGAACAGTGACGACAGCG 340294 Query 282473 TCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATT 282532 || || || || ||| | |||||| || |||| |||||||| | || ||||| Sbjct 340293 TCAGTAACGGTTTGTCCCAAATAAGCTTCGGCGGTTTCCTTCATTTTGGTCAAGATCATG 340234 Query 282533 GATGAAATTTGTTCTGGAGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATA 282591 ||||| || |||||| | |||| || | ||| |||| ||| || | || Sbjct 340233 GATGAGCATTCTTCTGGGGTGAATTGTTTAGTTTCTCCCTTGAATTGAATCTCGATCTTA 340174 Query 282592 TGGTTTATTAC--CAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAAC- 282648 ||| | | | | | ||| || |||||||| | |||||| || ||| || Sbjct 340173 CATTTTCCTCCTTCGGCTGAGACAACCTTGAATGGCCAGTGTTTCATGTCATCTTGCACG 340114 Query 282649 -ACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAA--TAGTATTGGT 282705 |||| || | || | ||| || || | || || || ||||| | ||| ||| Sbjct 340113 GCCTTT--TCGTCGAATTTTCTGCCGATAAGTCTCTTGGCGTCAAAGACTGAGTTTTG-- 340058 Query 282706 TGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAA 282765 ||| || | || |||| | ||||| |||||||| | || | |||| || || ||||| Sbjct 340057 TGGGTTCATGGCGACTTGGTTCTTGGCAGCATCTCCTAACAAACGTTCAGTGTCAGTAAA 339998 Query 282766 TGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACC 282825 | || || ||||| || || | || ||||| || || || ||||||||||| || || Sbjct 339997 AGCGACGTAAGATGGGGTAGTTCTGTTTCCTTGGTCGTTGGCGATAATTTCAACCTTTCC 339938 Query 282826 ATTTTGCCATACACCTA 282842 || ||| | ||||||| Sbjct 339937 ATGTTGGAAAACACCTA 339921 >seq42 Length=343515 Score = 156 bits (172), Expect = 3e-32 Identities = 363/543 (67%), Gaps = 11/543 (2%) Strand=Plus/Minus Query 282284 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 282343 || ||||| || | |||||| | || | ||| ||||| || | | || ||||| Sbjct 229405 GTACCACCTCCGAGATCAAAGACGAGGATGTTCTTTTCTCCCTCCT---TCTTGTCAAGT 229349 Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| || | |||||| || |||||||| || || ||||| | | || | ||||| Sbjct 229348 CCATATGCGATAGCAGCGGCTGTTGGTTCGTTGATGATTCTTACGATGTTCAATCCAGCG 229289 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 || |||| ||||| || || ||||||||||| | ||| || ||||| || || || || Sbjct 229288 ATGGTTCCGGCATCCTTGGTAGCTTGTCTTTGGGCATCATTGAAATAAGCTGGGACGGTG 229229 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTT 282523 | ||||| | | ||||| ||||| | || | || ||| |||||||| | Sbjct 229228 ACTACGGCGTGCTTGACTTCCTTTCCGAGGTATGTTTCGGCGATTTCCTTCATTTTGGTC 229169 Query 282524 AAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGATATGAT-AC 282582 |||| ||| | ||| || | ||||||||| | |||||||||| || | || | || Sbjct 229168 AAAACCATGGCTGAGATCTCTTCTGGAGAGAAGACCTTGGATTCAGTTCCA-ATCTTGAC 229110 Query 282583 TTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGA 282642 | | | ||||| || | | || || ||||||||||| ||||||| || || Sbjct 229109 TGATACGTGGGGTTTGTTGCTCTTGTCAAGAATCTTAAATGGCCACAATTTCATGTCGGA 229050 Query 282643 TTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATT 282702 ||| ||| | | |||| | || ||||| || | || || || || || || ||||| Sbjct 229049 TTGGACAGTCTTGTCAGTGAACTCTCTTCCTACCAAACGCTTGATGTCGAAGATGGTATT 228990 Query 282703 GGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAG---ATGTTCTGTCTC 282759 ||||| | ||||| ||||| |||||||| || || | | | || || Sbjct 228989 TTCAGGATTTGAGGTCAATTGATTCTTGGCGGCATCTCCGATAAGTCTCTCTCCAGTTTC 228930 Query 282760 T---GTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 282816 | | ||| | || ||||| || || | | ||| ||||||||||| || || ||||| Sbjct 228929 TGAAGCAAAGGCGACGTATGAAGGGGTGATTCTATTTCCTTGATCATTGGCGATGATTTC 228870 Query 282817 AAC 282819 ||| Sbjct 228869 AAC 228867 >seq67 Length=163726 Score = 150 bits (166), Expect = 1e-30 Identities = 231/327 (71%), Gaps = 8/327 (2%) Strand=Plus/Minus Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT-ACTTGGAAAAGTCC 282252 || ||||| || |||||||| | || ||| | ||| ||||| |||| || | ||| Sbjct 39289 TCGAAATCCTCTCCTCCCAAATGGACATCTCCGCAAGTA-CTCTTGACTTCAAAGATTCC 39231 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 | || ||| |||| | ||| ||| || |||||||||| ||| |||| | || Sbjct 39230 CTTTTGAAGCTCTAAAATTGAAACGTCAAAAGTACCACCACCCAAATCGAAAACAGTAAC 39171 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 || || |||| || || | |||||| |||| |||||| || |||||||| Sbjct 39170 GGTC------TTATCTTCAGACTTCTCCAAACCATAAGCAAGAGCAGCTGCTGTTGGTTC 39117 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 ||| |||| ||| | ||||| | |||||||||| ||| ||||| || ||||||||||| Sbjct 39116 ATTGATAACTCTAAGTACATTCAAACCAGCAATTTGTCCAGCATCCTTTGTGGCTTGTCT 39057 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAAT 282492 ||| ||||| || ||||| |||||||| |||| ||||||| | ||| |||| | Sbjct 39056 TTGAGAATCATTGAAATAAGCAGGAACGGTAACGACGGCATTCTTGACTGTAGTTCCGAG 38997 Query 282493 ATAAGCGCTTGCTGTTTGTTTCATTTT 282519 ||||| ||| |||| |||||||| Sbjct 38996 GTAAGCTTCTGCGGTTTCCTTCATTTT 38970 Score = 91.5 bits (100), Expect = 1e-12 Identities = 108/145 (74%), Gaps = 1/145 (1%) Strand=Plus/Minus Query 86109 ACTTC-CTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACAT 86167 ||||| | ||||| || |||||||| ||||| ||||||||||| || | | |||| |||| Sbjct 39156 ACTTCTCCAAACCATAAGCAAGAGCAGCTGCTGTTGGTTCATTGATAACTCTAAGTACAT 39097 Query 86168 CTAAACCCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATG 86227 ||||| ||||||| ||| ||| || |||||||| || | ||||| ||||| | Sbjct 39096 TCAAACCAGCAATTTGTCCAGCATCCTTTGTGGCTTGTCTTTGAGAATCATTGAAATAAG 39037 Query 86228 CTGGTACAGTAATAACTGCTTTATT 86252 | || || |||| || || || || Sbjct 39036 CAGGAACGGTAACGACGGCATTCTT 39012 >seq27 Length=454196 Score = 131 bits (144), Expect = 1e-24 Identities = 125/159 (79%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 282324 TGTCTTGGTTT--TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381 ||||||| | | ||||||| |||||| || | ||| || || ||||||||||| ||||| Sbjct 158700 TGTCTTGTTGTCATTATCAAAACCATAAGCGATAGCGGCGGCCGTTGGTTCATTGATAAT 158759 Query 282382 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 282441 ||| |||||||||| ||||||||| |||||| ||| || | || |||||| ||||| Sbjct 158760 TCTTAAAACATTAAAACCAGCAATCTCTCCTGCTATTTTTGTAGATTCTCTTTGAGAATC 158819 Query 282442 GTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTAC 282480 ||||||| ||||| ||||| ||||| |||| |||| Sbjct 158820 ACTAAAATAAGCAGGGACAGTGATAACAACATCACTTAC 158858 Score = 91.5 bits (100), Expect = 1e-12 Identities = 95/122 (78%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 282357 CAGCAGCAGTTGGTTCA-TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 282415 |||| | || |||||| |||||| || |||| || ||||| || || ||| ||| ||| Sbjct 171052 CAGCGGATGTGGGTTCAGTTAATACTT-TCAAGACTTTAAGTCCTGCGATTTCTCCAGCA 171110 Query 282416 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCT 282475 | |||||| ||||| |||| ||| |||||||| ||||||||||| |||||||| || Sbjct 171111 TTTTTAGTTGCTTGCTTTTGACAATTATTAAAATAAGCAGGAACAGTGATAACGGCTTCA 171170 Query 282476 GT 282477 || Sbjct 171171 GT 171172 >seq6 Length=947499 Score = 131 bits (144), Expect = 1e-24 Identities = 380/583 (65%), Gaps = 19/583 (3%) Strand=Plus/Minus Query 282274 AACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGT- 282332 ||||||| || ||||| || | ||| || ||||| || || |||||||| | | Sbjct 163213 AACATCAAAAGTACCACCTCCAAGATCGAAGATAAGAACGGTCTTTTCTTTGGTTCCGCC 163154 Query 282333 -----TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAA 282387 |||| || | |||||| || | |||||||||||||| || ||||| ||||| | Sbjct 163153 GCTAGTTTTGTCCAAACCATAAGCGATGGCAGCAGCAGTTGGCTCGTTAATGATTCTGAG 163094 Query 282388 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAA 282447 |||||||| |||||||| ||| || || || |||||||||||||| || || || || Sbjct 163093 GACATTAAGTCCAGCAATGGCTCCGGCGTCCTTGGTGGCTTGTCTTTGGGAGTCATTGAA 163034 Query 282448 ATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGT 282507 || || |||||||| | ||||| || | || | ||| | ||||| || || Sbjct 163033 GTAAGCTGGAACAGTGACGACGGCGTCAGAAACGGTGTGTCCCAAGTAAGCTTCGGCAGT 162974 Query 282508 TTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTC 282567 || ||||| || | || ||||| || || | || ||| || | ||| ||| ||| Sbjct 162973 TTCCTTCATCTTGGTCAAGATCATGGAGGAGACTTCTTCGGGGGTGAATTCCTTCTTTTC 162914 Query 282568 -ATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAA-------TAACTTTA 282619 |||| || || || || | ||| | || || ||| || Sbjct 162913 TCCCTTGA-ATTCAAC----AACGATCTTGCATTTTCCTGATGAAGCGGCTTCAACCTTG 162859 Query 282620 AATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAAT 282679 |||||||||| ||||| || |||||| ||| || | || | ||| || || | | Sbjct 162858 AATGGCCAATGCTTCATGTCATCTTGAACGGCTTGTTCGTCGAACTTTCTTCCGATGAGT 162799 Query 282680 CGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCT 282739 | || || || || | || || || || | || |||| | ||||| |||||| Sbjct 162798 CTCTTGGCGTCGAAGACAGAGTTCTGGGGGTTCATGGCGACTTGGTTCTTGGCAGCATCT 162739 Query 282740 CCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGA 282799 || | || | |||| | || | || | ||||| || || || || | || ||||| Sbjct 162738 CCTAACAAACGTTCAGAGTCGTTGAAAGCTACATAAGAGGGTGTAGTTCTGTTTCCTTGG 162679 Query 282800 TCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTA 282842 || || || || ||||| || || || | ||| |||| |||| Sbjct 162678 TCGTTAGCGATGATTTCGACCTTTCCGTGTTGGAATACTCCTA 162636 >seq78 Length=127395 Score = 89.7 bits (98), Expect = 4e-12 Identities = 165/235 (70%), Gaps = 13/235 (6%) Strand=Plus/Plus Query 282357 CAGCAGCAGTTGGTTCA-TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 282415 |||| | || |||||| |||||| || | || || ||||| || |||||| || ||| Sbjct 122422 CAGCGGATGTGGGTTCAGTTAATACTTTT-AAGACTTTAAGTCCTGCAATTTCGCCAGCA 122480 Query 282416 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCT 282475 | ||| || ||||| |||| ||| |||||||| |||||||||||||||||||| || Sbjct 122481 TTTTTGGTCGCTTGCTTTTGATAATTTTTAAAATAAGCAGGAACAGTAATAACGGCTTCA 122540 Query 282476 GTTACTTCTTTTCCAA--TATAAGCGCTT--GCTGTTTGTTTCATTTTACTTAAAATCAT 282531 || | |||| ||| || || ||| || |||| ||| | || | ||||| Sbjct 122541 GTGA----TTTTGCAACTTAAAAATTCTTCCGCAGTTTTTTTTAAGTTTTTCAAAATATG 122596 Query 282532 TGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGATATGATACTTCA 282586 | || |||| |||||| | |||| | || | || ||||| || ||||||| Sbjct 122597 AGCTGCAATTGCTTCTGGTGTATATCGTTTTGTTT--TTTTGCCAT-CTACTTCA 122648 >seq35 Length=384836 Score = 89.7 bits (98), Expect = 4e-12 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 282356 GCAGCAGCAGTTGGTTCA-TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGC 282414 ||||| | || || ||| |||||| || |||| || ||||| || || ||| ||| || Sbjct 82967 GCAGCGGATGTGGGCTCAGTTAATACTT-TCAAGACTTTAAGTCCTGCGATTTCTCCAGC 82909 Query 282415 ATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATC 282474 || ||| || |||||| |||| ||| |||||||| ||||||||||| |||||||| || Sbjct 82908 ATTTTTGGTCGCTTGTTTTTGACAATTATTAAAATAAGCAGGAACAGTGATAACGGCTTC 82849 Query 282475 TGT 282477 || Sbjct 82848 AGT 82846 >seq30 Length=447140 Score = 89.7 bits (98), Expect = 4e-12 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 161035 GAtttttttCATGTATTCGAATGGATTATCAACATTGAATTTTTTGCG-ATAACCAAGAT 161093 ||| |||| ||| | || || ||||| | | ||| |||||||| | | ||||| | Sbjct 100501 GATATTTTCCATAAACTCAAAAGGATTTTTAGTGTTGTATTTTTTGGGTAGTTCCAAGGT 100560 Query 161094 CTACAAGTAATCTGTCAGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATAC 161153 | | |||| || ||||| |||| || ||||||||||| || || |||||| | Sbjct 100561 C-ATGAGTAGATGATCGGCAACGTATTCGATGTATTGAGACATAAGGTCGTGATTCATTC 100619 Query 161154 CAAGAAGTTTACACGGAAGAGAATCATTAATAAATTCTTCTTCAATTTCAATCGCTTCGT 161213 | ||||| || || ||||| || | | |||||| | ||| ||||||| |||||| Sbjct 100620 CGAGAAGAGAGCATGGTAGAGACTCCGTCAAAAATTCCTTTTCGATTTCAACGGCTTCGC 100679 Query 161214 CAATAATTTGGTA 161226 ||||||||||||| Sbjct 100680 CAATAATTTGGTA 100692 Score = 89.7 bits (98), Expect = 4e-12 Identities = 165/235 (70%), Gaps = 13/235 (6%) Strand=Plus/Plus Query 282357 CAGCAGCAGTTGGTTCA-TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 282415 |||| | || |||||| |||||| || | || || ||||| || |||||| || ||| Sbjct 401707 CAGCGGATGTGGGTTCAGTTAATACTTTT-AAGACTTTAAGTCCTGCAATTTCGCCAGCA 401765 Query 282416 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCT 282475 | ||| || ||||| |||| ||| |||||||| |||||||||||||||||||| || Sbjct 401766 TTTTTGGTCGCTTGCTTTTGATAATTTTTAAAATAAGCAGGAACAGTAATAACGGCTTCA 401825 Query 282476 GTTACTTCTTTTCCAA--TATAAGCGCTT--GCTGTTTGTTTCATTTTACTTAAAATCAT 282531 || | |||| ||| || || ||| || |||| ||| | || | ||||| Sbjct 401826 GTGA----TTTTGCAACTTAAAAATTCTTCCGCAGTTTTTTTTAAGTTTTTCAAAATATG 401881 Query 282532 TGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGATATGATACTTCA 282586 | || |||| |||||| | |||| | || | || ||||| || ||||||| Sbjct 401882 AGCTGCAATTGCTTCTGGTGTATATCGTTTTGTTT--TTTTGCCAT-CTACTTCA 401933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740607275890446