Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhabditophanes_20sp._20KR3021_20[genbank_20GCA_5F000944355.1_202014-
09-24] 471 sequences; 47,267,908 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq32 98.7 6e-16
>seq32
Length=411647
Score = 98.7 bits (108), Expect = 6e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||| | ||| ||||| || || || || ||||| ||||| || || ||
Sbjct 326288 CCTCCACGAAGTCTCAAAACCAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCGGAC 326229
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || ||| | ||||| | ||| || |||||||| || | ||| ||||| || || ||
Sbjct 326228 AAAGTACGCCCATCTTCCAATTGCTTTCCGGCAAAGATAAGACGTTGTTGATCTGGGGGA 326169
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| ||| ||||||||| |||||| | ||| ||| | ||| ||||| | || ||
Sbjct 326168 ATTCCTTCCTTGTCTTGGATCTTG-GCTTTGACGTTGTCAATGGTGTCAGAGGCTTCGAC 326110
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || ||||| ||||| | || || || |||||||||||
Sbjct 326109 TTCAAGAGTAATTGTTTTCCCGGTAAGAGTCTTAACGAAAATCTGCAT 326062
Score = 93.3 bits (102), Expect = 3e-14
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||||||| | | ||||| || || || || ||||| ||||| || || ||
Sbjct 326060 CCTCCTCTAAGTCTAAGAACCAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCGGAT 326001
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| | ||||| | |||||| || ||||| ||||| | ||||| || || ||
Sbjct 326000 AAGGTTCTTCCATCTTCCAATTGTTTTCCAGCAAAGATTAATCTTTGTTGATCTGGGGGA 325941
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTC-GCTCTCCA 34657
| ||| ||||||||| |||||| | || ||| | ||| ||||| ||| || |
Sbjct 325940 ATTCCTTCCTTGTCTTGGATCTTG-GCCTTGACGTTGTCAATGGTGTCAGAAGCT-TCAA 325883
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| | || || ||||| || || || || || ||||||||||||||
Sbjct 325882 CTTCAAGAGTAATAGTTTTTCCTGTCAAAGTCTTGACAAAAATCTGCAT 325834
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314727793353743
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |