Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhabditophanes_20sp._20KR3021_20[genbank_20GCA_5F000944355.1_202014- 09-24] 471 sequences; 47,267,908 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq30 109 6e-19 >seq30 Length=447140 Score = 109 bits (120), Expect = 6e-19 Identities = 333/507 (66%), Gaps = 6/507 (1%) Strand=Plus/Plus Query 23508 ACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAA 23567 ||| |||||||||| ||| |||||||| || || |||||| ||||| || ||| Sbjct 100738 ACAGGCAAAATCACGATGGAGGCCTTCGTCTCTTGAAATCAACTCATTGGATTGACATAA 100797 Query 23568 TCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAA 23627 || | | | ||| | || ||||| || || | ||||||||||||||||||||| Sbjct 100798 ACCATGTAATTTGCCTTTGCTCTTCATCCAGAAGATAGAAGCAAATGATCCGGAAAAGAA 100857 Query 23628 AATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGA 23687 ||| ||||| || || ||||| || | || || || | |||| | ||| Sbjct 100858 AATCCCCTCTACGGCTGCAAAAGCAATGCATCGCTCCCCGAAAGGAGCATCCTTGTCATT 100917 Query 23688 AATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTT-TCAATTGCTT 23746 ||||||||| | ||| | |||||| || | ||| | | ||| || | || | Sbjct 100918 AATCCATTTCAAAGCCCAGTCAGCCTTTTTCTTGATACA-TGGGTAGTTCTCCAAAGCAT 100976 Query 23747 TTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACA 23806 | || | | ||||| | ||| || || || | ||||| || ||||| Sbjct 100977 TAAACAACTTATCCTTTTCCTTTGCATCAGTAATGTAAGCCTCAATCAGCTTCGAATACA 101036 Query 23807 TTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACA 23866 | |||||||| || ||||||||| || || |||| |||||| | ||| || | || Sbjct 101037 TCTCAGAATGGATGTTTTCAATAAAGATTTGGAACCGGTAAAAATAGAGAGCCTCGGGCA 101096 Query 23867 ATTGAACATCATTAAAAAATC-TTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCA 23925 || ||| |||| | || | || |||| ||||| |||| || || ||||| ||| Sbjct 101097 TTTTAACTTCATCCATGAAGCGTTCTAGC-AAATTGGCGTTGACTATGCCATCTGATGCA 101155 Query 23926 GCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTG-ATAATTTTTTCCA 23984 ||||| ||||| | |||| | | || | | ||| || || | || ||| | ||| Sbjct 101156 GCAAAAAAAGCCAATACATGTGACAGGAATTTGCGTTC-TCCGTCGTTTAGTTTGTCCCA 101214 Query 23985 ATCATTAATATCTTTTGATAAATCAAC 24011 |||| || ||| ||||| || ||||| Sbjct 101215 ATCAGTACGATCCTTTGACAAGTCAAC 101241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521484929739400