Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq3755 120 3e-22 >seq3755 Length=20876 Score = 120 bits (132), Expect = 3e-22 Identities = 228/334 (68%), Gaps = 4/334 (1%) Strand=Plus/Minus Query 16238 ATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATC 16297 ||||| ||||| || || || || ||||| || ||||| |||||||| || ||| Sbjct 10514 ATAAGCTCGTTACTGAACGTCAAGCCGGGCATGAGGCCCCGTTTTTTTAACCAAAAAATC 10455 Query 16298 GCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCC 16357 | || || |||||||||||||| || || || | || ||||| | || ||||| Sbjct 10454 GACGCGAAACTACCCGAAAAGAATATGCCTTCGACGGCGGCGAAAGCCACCAAACGTTCG 10395 Query 16358 GCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATA 16417 || |||| | | ||||| |||||||||| |||||| ||||| | || | Sbjct 10394 CCGAACGTCGATTGTTTATCGGCAATCCATTTCAAAGCCCATTGAGCTTTCTTTTGAACG 10335 Query 16418 CAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTC--CTGAATATCGATTATAT 16475 ||| | |||||||| || || || | | |||||||| | | || ||| || | Sbjct 10334 CAAGGTAAAGTTTCTATAGCATTGAAAAGATGATCTTTTTCGACGGGATCGCGA--ATGT 10277 Query 16476 ACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATC 16535 | || || || ||||| |||||||| || || || || || || || || ||||| | Sbjct 10276 AGGTTTCGATGAGTAAGGAATACATTTCGGAATGGATATTTTCGATTGCAATTTGAAAGC 10217 Query 16536 CATAGAAGCATCGAGCCTCCGCTATTTGTACTTC 16569 |||| || || ||||| |||| | ||| ||||| Sbjct 10216 CATAAAAACAACGAGCTTCCGTAACTTGCACTTC 10183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511014620970840