Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq391 93.3 6e-14 >seq391 Length=62077 Score = 93.3 bits (102), Expect = 6e-14 Identities = 83/103 (81%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 124666 TTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAA 124725 |||||||| ||| || ||| | || || |||| || ||| |||||||||||||||| Sbjct 22554 TTATTTTTT-AGGCAAGCAACTCGAAGACGGTCGTACGTTATCCGATTATAATATTCAAA 22612 Query 124726 AAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||| || |||||||||||||| ||||| || ||||| || Sbjct 22613 AAGAATCGACGTTGCATTTGGTTTTGCGTTTGCGCGGTGGCAT 22655 Score = 84.2 bits (92), Expect = 3e-11 Identities = 107/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | || || |||| ||||| || || || | || | ||| | Sbjct 24270 AATGCAAATTTTCGTCAAAACGTTAACGGGCAAGACGATCACGTTGGAAGTAGAACCGTC 24329 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 || |||||| ||| ||||||| |||||| ||||| ||||||||||| ||||| |||| Sbjct 24330 CGACACAATTGAAAATGTTAAAAC-GAAAATCCAAGACAAAGAAGGTATTCCACCAGATC 24388 Query 124657 AACAAAGGCTTATTTTTGCAGGAAA 124681 ||||| |||| || || || || || Sbjct 24389 AACAACGGCTGATCTTCGCTGGTAA 24413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 754865450601600