Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq59665 89.7 4e-13 seq13192 82.4 6e-11 >seq59665 Length=524 Score = 89.7 bits (98), Expect = 4e-13 Identities = 72/86 (84%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 20044 TTTCCCT-TATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATG 20102 |||||| | ||||| ||||||| || |||||||| ||||| || ||||| |||||||| Sbjct 419 TTTCCCACTTTTAACCACGAAACAAGTTTTTTGGAAGGGCGTCGTCGAAGAATTATTATG 478 Query 20103 GTTTATTAAAGGATCAACAAATTCTA 20128 ||||||| ||||||| || ||||||| Sbjct 479 GTTTATTGAAGGATCGACCAATTCTA 504 >seq13192 Length=5578 Score = 82.4 bits (90), Expect = 6e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 20054 TAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAG 20113 |||| || |||| || |||||||||||||| || ||||| |||||||||||||| ||| Sbjct 2811 TAACCACAAAACAAGTTTTTTGGAAAGGCGTCGTCGAAGAATTATTATGGTTTATCGAAG 2752 Query 20114 GATCAACAAATTCTA 20128 |||| || ||||||| Sbjct 2751 GATCGACCAATTCTA 2737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398879754055465