Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq3755 163 3e-35 >seq3755 Length=20876 Score = 163 bits (180), Expect = 3e-35 Identities = 264/376 (70%), Gaps = 3/376 (1%) Strand=Plus/Minus Query 14209 AAAATCACAATGAAGGC-CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 14267 ||| ||| |||||| | ||||||| || ||||| ||||| || || || || | Sbjct 10546 AAATTCAAAATGAACTCACCTCATCCCTCGATATAAGCTCGTTACTGAACGTCAAGCCGG 10487 Query 14268 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTC 14327 |||| | || ||||||||||||||||| || | ||||| || ||||||||||| | Sbjct 10486 GCATGAGGCCCCGTTTTTTTAACCAAAAAATCGACGCGAAACTACCCGAAAAGAATATGC 10427 Query 14328 CCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCC 14387 | || || || || || || | || ||||| || |||| | || ||| | | |||| Sbjct 10426 CTTCGACGGCGGCGAAAGCCACCAAACGTTCGCCGAACGTCGATTGTTTATCGGCAATCC 10367 Query 14388 ATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATA 14447 |||| |||||||| || ||| |||| || || | ||||| |||||||| || | Sbjct 10366 ATTTCAAAGCCCATTGAGCTTTCTTTTGAACGCAAGGTAAAGTTTCTATAGCATTGAAAA 10307 Query 14448 AATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 14507 ||| || || || | | |||||| || || || |||||| ||||||||| | Sbjct 10306 GATGATCTTTTTCGACGGGATCGCGAATGTAGGTTTCGATGAGTAAGGAATACATTTCGG 10247 Query 14508 AGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTA 14567 | || || ||||| || || || ||||| ||||||||||| | |||||| | ||| | Sbjct 10246 AATGGATATTTTCGATTGCAATTTGAAAGCCATAAAAACAACGAGCTTCCGTAACTTGCA 10187 Query 14568 CCTC-TGAGTAAAATC 14582 | || |||| |||||| Sbjct 10186 CTTCTTGAG-AAAATC 10172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481968544415160