Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq3755 158 1e-33 >seq3755 Length=20876 Score = 158 bits (174), Expect = 1e-33 Identities = 265/377 (70%), Gaps = 5/377 (1%) Strand=Plus/Minus Query 13877 AAAATCACAATGAAGGC-CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 13935 ||| ||| |||||| | ||||||| || ||||| ||||| || || || || | Sbjct 10546 AAATTCAAAATGAACTCACCTCATCCCTCGATATAAGCTCGTTACTGAACGTCAAGCCGG 10487 Query 13936 GCATCAATCCTCGtttttttAACCAAAATATTGCAGC-AAATGACCCGGAAAAGAATATT 13994 |||| | || ||||||||||||||||| || | || ||| ||||| |||||||||| Sbjct 10486 GCATGAGGCCCCGTTTTTTTAACCAAAAAATCGACGCGAAACTACCCG-AAAAGAATATG 10428 Query 13995 CCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATC 14054 || || || || || || || | || ||||| || |||| | || ||| | | ||| Sbjct 10427 CCTTCGACGGCGGCGAAAGCCACCAAACGTTCGCCGAACGTCGATTGTTTATCGGCAATC 10368 Query 14055 CATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAAT 14114 ||||| |||||||| || ||| |||| || || | ||||| |||||||| || Sbjct 10367 CATTTCAAAGCCCATTGAGCTTTCTTTTGAACGCAAGGTAAAGTTTCTATAGCATTGAAA 10308 Query 14115 AAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 14174 | || || || || | | |||||| || || || |||||| ||||||||| Sbjct 10307 AGATGATCTTTTTCGACGGGATCGCGAATGTAGGTTTCGATGAGTAAGGAATACATTTCG 10248 Query 14175 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGT 14234 || || || ||||| || || || ||||| |||||||| || | |||||||| ||| Sbjct 10247 GAATGGATATTTTCGATTGCAATTTGAAAGCCATAAAAACAACGAGCTTCCGTAACTTGC 10188 Query 14235 ACTTC-CGAGTAAAATC 14250 ||||| ||| |||||| Sbjct 10187 ACTTCTTGAG-AAAATC 10172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479352990625800