Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq3755 158 1e-33 >seq3755 Length=20876 Score = 158 bits (174), Expect = 1e-33 Identities = 245/349 (70%), Gaps = 1/349 (0%) Strand=Plus/Minus Query 13665 AAAATCACAATGAAGGC-CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 13723 ||| ||| |||||| | ||||||| || ||||| ||||| || || || || | Sbjct 10546 AAATTCAAAATGAACTCACCTCATCCCTCGATATAAGCTCGTTACTGAACGTCAAGCCGG 10487 Query 13724 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTC 13783 |||| | || ||||||||||||||||| || | ||||| || ||||||||||| | Sbjct 10486 GCATGAGGCCCCGTTTTTTTAACCAAAAAATCGACGCGAAACTACCCGAAAAGAATATGC 10427 Query 13784 CCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCC 13843 | || || || || || || | | ||||| || |||| | || ||| | | |||| Sbjct 10426 CTTCGACGGCGGCGAAAGCCACCAAACGTTCGCCGAACGTCGATTGTTTATCGGCAATCC 10367 Query 13844 ATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATA 13903 |||| |||||||| || ||| |||| || || | ||||| || |||||||| | Sbjct 10366 ATTTCAAAGCCCATTGAGCTTTCTTTTGAACGCAAGGTAAAGTTTCTATAGCATTGAAAA 10307 Query 13904 AATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 13963 ||| || || || | | |||||| || || || |||||| ||||||||| | Sbjct 10306 GATGATCTTTTTCGACGGGATCGCGAATGTAGGTTTCGATGAGTAAGGAATACATTTCGG 10247 Query 13964 AGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14012 | || || ||||| || || || ||||| ||||||||||| | |||||| Sbjct 10246 AATGGATATTTTCGATTGCAATTTGAAAGCCATAAAAACAACGAGCTTC 10198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478214681152680