Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3755 145 1e-29 >seq3755 Length=20876 Score = 145 bits (160), Expect = 1e-29 Identities = 256/364 (70%), Gaps = 12/364 (3%) Strand=Plus/Plus Query 125196 CGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGT-GCTTTTACGGATTCCAAATCAT 125254 ||||| |||||||| || || | || | |||| | ||||| || || ||||| Sbjct 10171 CGATTTTCTCAAGAAGTGCAAGTTACGGAAGC-TCGTTGTTTTTATGGCTTTCAAATTGC 10229 Query 125255 GATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC 125314 || || || | || || |||||||| || ||| || || | |||||||||||||| Sbjct 10230 AATCGAAAATATCCATTCCGAAATGTATTCCTTACTCATCGAAACCTACATTCGCGATCC 10289 Query 125315 GCAACGTAAACACATGCTCTTT--AACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372 | || ||| | || ||||| || || || || || | || | | | || || Sbjct 10290 -CGTCGAAAA-AGATCATCTTTTCAATGCTATAGAAACTTTACCTTGCGTTCAAAAGAAA 10347 Query 125373 GCTCAATGGGTGATTCGGTGGAT---CGATGACGACAAGTCTTCGTACGCCGACAGACTG 125429 |||||||||| | ||||| |||| | |||| || ||| || ||| | || Sbjct 10348 GCTCAATGGGCTTTGAAATGGATTGCCGATAA--ACAA-TCGACGTTCGGCGAACGTTTG 10404 Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 ||||| ||||||||||| || ||||| ||||||||||||||||| ||| | || |||||| Sbjct 10405 GTGGCTTTCGCCGCCGTCGAAGGCATATTCTTTTCGGGTAGTTTCGCGTCGATTTTTTGG 10464 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 | || || || || ||||||||||| ||||| |||||||||| ||||||| | || Sbjct 10465 TTAAAAAAACGGGGCCTCATGCCCGGCTTGACGTTCAGTAACGAGCTTATATCGAGGGAT 10524 Query 125550 GAGG 125553 |||| Sbjct 10525 GAGG 10528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740479904760120