Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq391 91.5 9e-14 >seq391 Length=62077 Score = 91.5 bits (100), Expect = 9e-14 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33236 AATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACT 33295 |||||||||||||| || |||| |||||||| ||||| || |||| | |||||| Sbjct 22501 AATATTAAACGTTGTTGATCCGGAGGTATGCCCTCTTTGTCTTGAATCTTCGTTTTTACG 22442 Query 33296 GTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTT 33355 | | || || ||| |||| || |||| || ||||| || ||||| | |||||| Sbjct 22441 TTCTCGATGGTATCGGACGGTTCCACTTCCAAGGTGATCGTCTTGCCCGTCAAAGTTTTG 22382 Query 33356 ACGAAAATTTGCATG 33370 ||||||||||||||| Sbjct 22381 ACGAAAATTTGCATG 22367 Score = 84.2 bits (92), Expect = 1e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 33236 AATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTT-AC 33294 || |||||||||||||| || | || ||||||||||| || || ||| || || Sbjct 23762 AAGATTAAACGTTGCTGATCTGGTGGAATGCCTTCTTTGTCCTGGATTTT-TGTCTTGAC 23704 Query 33295 TGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTT 33354 ||| |||||||| |||| || ||||| ||||| ||||||||||| || ||||| Sbjct 23703 GTTTTCGATCGTGTCCGACGGTTCGACTTCCAGCGTTATAGTTTTTCCCGTCAGCGTTTT 23644 Query 33355 TACGAAAATTTGCAT 33369 || ||||||||||| Sbjct 23643 GACAAAAATTTGCAT 23629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318534637376226