Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq11916 102 7e-17 >seq11916 Length=6380 Score = 102 bits (112), Expect = 7e-17 Identities = 135/187 (72%), Gaps = 3/187 (2%) Strand=Plus/Plus Query 5585 TCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGC---CG 5641 ||||| |||| || || ||||| ||||| | || || || ||||| | | Sbjct 1815 TCGCAAATCAATTGGGCGATTCGATCGCCTTTTTTGACGCTAAATTCGTTATTTTTATCA 1874 Query 5642 AAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCC 5701 || ||||||| | ||| || |||||||| || |||||||| | ||||| || || Sbjct 1875 AAATTGAACAAAATGACGGACAAATTGCCGCGATAATCGGCGTCGACGACGCCGGCCCCG 1934 Query 5702 ACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCCA 5761 ||||||||||| | ||| |||||| ||||| || || |||||||||||||| || || Sbjct 1935 ACGTCGATGAAATTTTTGGCCGCCAAACCGGAACGAGGCGCCACGCGGCCGTAACAACCG 1994 Query 5762 TCGGGAA 5768 ||||||| Sbjct 1995 TCGGGAA 2001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429726625572344