Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq753 159 5e-35 >seq753 Length=48901 Score = 159 bits (176), Expect = 5e-35 Identities = 196/268 (73%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| || || ||||||| | | | || |||||||||||||| || || || || || || Sbjct 47456 CGCCAAACGCCATCGCAAAGTTTTGCGCGATAACATCCAAGGCATAACGAAACCGGCCAT 47515 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||| |||||||||| || || |||||||| || || ||| | || ||||| | Sbjct 47516 CCGTCGTTTGGCTCGTCGAGGCGGCGTCAAGCGCATCAGCGGCTTGATTTACGAAGAAAC 47575 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | |||||||| | ||| | ||| |||||||| || || || |||| ||| Sbjct 47576 GCGCGGCGTTTTGAAAGTGTTCTTGGAGAACGTTATCCGCGACGCCGTCACCTATTGCGA 47635 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || || || || || ||||| || | ||||| ||||||| || |||||||||||||| Sbjct 47636 ACATGCCAAGCGGAAAACTGTTACTGCTATGGACGTCGTCTACGCTTTGAAACGTCAAGG 47695 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | | || ||||| || ||||| Sbjct 47696 CCGCACGTTGTACGGTTTCGGCGGTTAA 47723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79018021983141