Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq3755 131 2e-25 >seq3755 Length=20876 Score = 131 bits (144), Expect = 2e-25 Identities = 252/376 (67%), Gaps = 1/376 (0%) Strand=Plus/Minus Query 21481 AAAATCACAATGCAAAC-CTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGG 21539 ||| ||| |||| | | | |||||||| ||| | || ||| || || || |||| Sbjct 10546 AAATTCAAAATGAACTCACCTCATCCCTCGATATAAGCTCGTTACTGAACGTCAAGCCGG 10487 Query 21540 GCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGC 21599 |||| | || | |||||||||||||| || ||||| || || |||||||| |||| Sbjct 10486 GCATGAGGCCCCGTTTTTTTAACCAAAAAATCGACGCGAAACTACCCGAAAAGAATATGC 10427 Query 21600 CCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCC 21659 | || ||||| || || || || || ||||| ||| | || |||| |||||| |||| Sbjct 10426 CTTCGACGGCGGCGAAAGCCACCAAACGTTCGCCGAACGTCGATTGTTTATCGGCAATCC 10367 Query 21660 ATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAAA 21719 |||| ||||||| || || | || || ||| | || || ||||| || |||| Sbjct 10366 ATTTCAAAGCCCATTGAGCTTTCTTTTGAACGCAAGGTAAAGTTTCTATAGCATTGAAAA 10307 Query 21720 GATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAG 21779 |||||| |||||| | |||| ||| ||||||||| | Sbjct 10306 GATGATCTTTTTCGACGGGATCGCGAATGTAGGTTTCGATGAGTAAGGAATACATTTCGG 10247 Query 21780 AATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAA 21839 |||| |||||||| || || || ||||| || |||||||| | || || | | ||| | Sbjct 10246 AATGGATATTTTCGATTGCAATTTGAAAGCCATAAAAACAACGAGCTTCCGTAACTTGCA 10187 Query 21840 CCTCGGAATAAAATCG 21855 | || | ||||||| Sbjct 10186 CTTCTTGAGAAAATCG 10171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531485006495880