Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3755 223 4e-53 >seq3755 Length=20876 Score = 223 bits (246), Expect = 4e-53 Identities = 257/346 (74%), Gaps = 0/346 (0%) Strand=Plus/Minus Query 93125 GATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAAT 93184 ||||| | ||| || ||||| || || || || | || || ||||| || | |||||| Sbjct 10517 GATATAAGCTCGTTACTGAACGTCAAGCCGGGCATGAGGCCCCGTTTTTTTAACCAAAAA 10458 Query 93185 ATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGT 93244 || || || |||||||| ||||| ||||| ||||| ||||| || || ||||| | |||| Sbjct 10457 ATCGACGCGAAACTACCCGAAAAGAATATGCCTTCGACGGCGGCGAAAGCCACCAAACGT 10398 Query 93245 TCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTA 93304 ||| | || | | ||| | |||||||| |||||||| | ||||| || | | Sbjct 10397 TCGCCGAACGTCGATTGTTTATCGGCAATCCATTTCAAAGCCCATTGAGCTTTCTTTTGA 10338 Query 93305 ATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATG 93364 | ||||||| ||||| ||||| || || || | |||| ||| | | ||| || ||| Sbjct 10337 ACGCAAGGTAAAGTTTCTATAGCATTGAAAAGATGATCTTTTTCGACGGGATCGCGAATG 10278 Query 93365 TATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAAT 93424 || || ||||| | | ||||||||||| ||||||| ||| || ||||||||||| || Sbjct 10277 TAGGTTTCGATGAGTAAGGAATACATTTCGGAATGGATATTTTCGATTGCAATTTGAAAG 10218 Query 93425 CCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATC 93470 || || ||||| | ||||||||| | ||||||||||||||||||| Sbjct 10217 CCATAAAAACAACGAGCTTCCGTAACTTGCACTTCTTGAGAAAATC 10172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556425494951880