Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq4817 86.0 7e-12 seq2525 82.4 8e-11 >seq4817 Length=16975 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 |||| | ||| |||| | |||||||||| |||| |||||||||||||||| ||||| Sbjct 12311 AAAAGATACTCTCCGGCCGGGAATCGAACCCGGGTCGCCCGCGTGACAGGCGGGAATACT 12252 Query 57059 CACCACTATACTACCGAGGA 57078 ||||||||||||||||| || Sbjct 12251 CACCACTATACTACCGAAGA 12232 >seq2525 Length=27391 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||||||||| || || |||||||| ||||||||||| || |||||| | Sbjct 2979 ACGCAACACCAAATGCAAGGTACTTTCCTTTTGGATATTGTAATCGCTCAAGGTCCGCCC 3038 Query 42053 GTCATCTAGCTGCTTACC 42070 ||| || ||||| ||||| Sbjct 3039 GTCTTCCAGCTGTTTACC 3056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542788163764080