Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2525 93.3 4e-14 seq391 82.4 7e-11 >seq2525 Length=27391 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || || |||| | ||||| || ||||| ||||||||||| ||||| ||||| Sbjct 3616 CTTACCAGCAAAAATCAAACGCTGTTGATCGGGCGGGATGCCTTCTTTGTCTTGAATCTT 3675 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | || | |||||| | ||||| || || | |||| ||||||||||| Sbjct 3676 GGTCTTTACGTTTTCGATCGTGTCCGACGGCTCGACTTCTAAAGTGATCGTTTTGCCGGT 3735 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 ||| |||||||||||||| ||||| Sbjct 3736 CAGGGTTTTTACGAAAATTTGCAT 3759 >seq391 Length=62077 Score = 82.4 bits (90), Expect = 7e-11 Identities = 109/149 (73%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 || ||| || ||| | || | || ||||| || || || |||||||| || || ||| Sbjct 22800 CTTCTTACCAGCGAAGATCAAACGTTGCTGATCCGGCGGAATGCCTTCTTTATCC-TGAA 22742 Query 133574 CTTTTGCTT-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||||| || || | || | |||||| | |||||||| || | |||| |||||| | Sbjct 22741 TTTTTGTTTTGACGTTTTCGATCGTGTCAGACGGCTCCACTTCCAACGTGATGGTTTTCC 22682 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661 | |||| ||||| ||||||||||||||| Sbjct 22681 CCGTCAACGTTTTGACGAAAATCTGCATG 22653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483042903917880