Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2525 89.7 1e-12 seq391 86.0 1e-11 >seq2525 Length=27391 Score = 89.7 bits (98), Expect = 1e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| ||||| || || || |||||||| ||| ||||||||| | || Sbjct 5378 AAAACTCTCACGGGAAAGACAATTACGTTGGAAGTCGAACCATCTGACACAATTGAGAAC 5319 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||||||| |||||||| || ||| || ||| | ||||||||| Sbjct 5318 GTGAAGACAAAGATTCAAGACAAAGAAGGCATCCCGCCAGATCAGCAACGTCTTATCTTC 5259 Query 206305 GCCGGAAAGCAGTT 206318 ||||| ||| ||| Sbjct 5258 GCCGGTGAGCTGTT 5245 >seq391 Length=62077 Score = 86.0 bits (94), Expect = 1e-11 Identities = 108/146 (74%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||||||| | || || ||||| ||||| ||||||||||| |||||| Sbjct 22657 CAGATTTTCGTCAAAACGTTGACGGGGAAAACCATCACGTTGGAAGTGGAGCCGTCTGAC 22716 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || ||||| || ||| ||||| ||||| || |||||||| ||| |||||| || Sbjct 22717 ACGATCGAAAACGTCAAAACAAAA-ATTCAGGATAAAGAAGGCATTCCGCCGGATCAGCA 22775 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGT 206317 | | | |||||||| || ||| ||| Sbjct 22776 ACGTTTGATCTTCGCTGGTAAGAAGT 22801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180873859805577