Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq20571 89.7 2e-14 seq19999 89.7 2e-14 seq794 89.7 2e-14 seq684 89.7 2e-14 seq10415 80.6 8e-12 seq8403 80.6 8e-12 >seq20571 Length=2890 Score = 89.7 bits (98), Expect = 2e-14 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 557 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAATCCCGG 501 >seq19999 Length=2994 Score = 89.7 bits (98), Expect = 2e-14 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 2498 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAATCCCGG 2442 >seq794 Length=48107 Score = 89.7 bits (98), Expect = 2e-14 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 37999 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAATCCCGG 38055 >seq684 Length=50668 Score = 89.7 bits (98), Expect = 2e-14 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 32636 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAATCCCGG 32580 >seq10415 Length=7642 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||| ||||||||| |||||||||||||||||||||| ||||||| | ||||| Sbjct 437 TAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCGATCCCGG 381 >seq8403 Length=9895 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||| ||||||||| |||||||||||||||||||||| ||||||| | ||||| Sbjct 251 TAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCGATCCCGG 307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15838758898365