Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2525 87.8 2e-12 seq391 86.0 6e-12 >seq2525 Length=27391 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| || || || ||| |||| ||| | ||||| || | | Sbjct 4569 ATGCAAATTTTTGTCAAAACGTTGACTGGCAAAACGATAACGTTGGAAGTAGAGCCGTCC 4510 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| |||||| | || ||| |||||| || ||||||||||| || ||||||||| Sbjct 4509 GATACGATCGAGAACGTCAAAACGAAAATTCAAGACAAAGAGGGTATCCCACCCGATCAG 4450 Query 25295 CAAAGACTCATTTACG 25310 ||| | | |||| || Sbjct 4449 CAACGTTTGATTTTCG 4434 >seq391 Length=62077 Score = 86.0 bits (94), Expect = 6e-12 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | || || ||||| || ||||| ||| | |||||| | ||||| || ||| Sbjct 21161 CATGCAAATCTTCGTTAAAACTTTGACCGGTAAAACCATCACGTTAGAAGTTGA-GCCGT 21219 Query 25234 C-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATC 25292 | ||||||||||| | || ||| |||||| ||||| |||||||| |||||||||| Sbjct 21220 CTGATACTATCGAAAACGTGAAAACCAAAATTCAAGATAAGGAGGGTATCCCGCCCGATC 21279 Query 25293 AGCA 25296 | || Sbjct 21280 AACA 21283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444746464143840