Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq3755 154 1e-32 >seq3755 Length=20876 Score = 154 bits (170), Expect = 1e-32 Identities = 239/335 (71%), Gaps = 11/335 (3%) Strand=Plus/Plus Query 43902 GTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTG 43961 |||| ||| | |||||||| ||| | | ||||| || ||||||||||| |||||||||| Sbjct 10169 GTCGATTTTCTCAAGAAGTGCAAGTTACGGAAGCTCGTTGTTTTTATGGCTTTCAAATTG 10228 Query 43962 CCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATG 44021 | || |||||||| ||||| |||||||| | || || || || ||||| ||| Sbjct 10229 CAATCGAAAATATCCATTCCGAAATGTATTCCTTACTCATCGAAACCTACATTCGCGATC 10288 Query 44022 GGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAA 44080 ||| || ||| | || ||||| |||||||| |||| |||| || || | ||| Sbjct 10289 CCGTCGAAAAAGATCATCTTTTCAATGCTATAGAAACTTTACCTTGCG-TTCAAAAGAAA 10347 Query 44081 GCAGACTGGGCCCTTAAATGGAT-----AAATTCAAATGATTCTTTTGGAGAACGACTTG 44135 || | ||||| | |||||||| | | ||| || | || || ||||| | | Sbjct 10348 GCTCAATGGGCTTTGAAATGGATTGCCGATAAACAATCGA--CGTTCGGCGAACGTTTGG 10405 Query 44136 TCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTT-GCGGCCATATTTTGG 44194 | || || || | || |||||||| |||||||| || | |||| ||| | || |||||| Sbjct 10406 TGGCTTTCGCCGCCGTCGAAGGCATATTCTTTTC-GGGTAGTTTCGCGTCGATTTTTTGG 10464 Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTT 44229 ||||| ||||| || | ||||| || |||||||| Sbjct 10465 TTAAAAAAACGGGGCCTCATGCCCGGCTTGACGTT 10499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397153071084685