Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq3755 118 1e-21 >seq3755 Length=20876 Score = 118 bits (130), Expect = 1e-21 Identities = 223/328 (68%), Gaps = 0/328 (0%) Strand=Plus/Minus Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || || || || ||||| | || |||||||| | |||||| || | || || || Sbjct 10499 AACGTCAAGCCGGGCATGAGGCCCCGTTTTTTTAACCAAAAAATCGACGCGAAACTACCC 10440 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 |||||||| || || || || || || || ||||| | |||| || || || | | Sbjct 10439 GAAAAGAATATGCCTTCGACGGCGGCGAAAGCCACCAAACGTTCGCCGAACGTCGATTGT 10380 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCA 23739 | ||| | ||||||||| | ||| | ||| ||| || || || | ||||| Sbjct 10379 TTATCGGCAATCCATTTCAAAGCCCATTGAGCTTTCTTTTGAACGCAAGGTAAAGTTTCT 10320 Query 23740 ATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAA 23799 || || || || ||| | |||||| | ||| || || || || || ||||| Sbjct 10319 ATAGCATTGAAAAGATGATCTTTTTCGACGGGATCGCGAATGTAGGTTTCGATGAGTAAG 10260 Query 23800 CTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCT 23859 ||||||||| ||||| |||||||| || ||||| ||||| ||||||||||| | |||| Sbjct 10259 GAATACATTTCGGAATGGATATTTTCGATTGCAATTTGAAAGCCATAAAAACAACGAGCT 10200 Query 23860 TCAGACAATTGAACATCATTAAAAAATC 23887 || | | ||| || || | | |||||| Sbjct 10199 TCCGTAACTTGCACTTCTTGAGAAAATC 10172 Score = 89.7 bits (98), Expect = 5e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 23209 ACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAAT 23268 || ||| |||||||||||| || |||||||||||||| |||||||| || || ||||| Sbjct 11525 ACGCCCGATTTTTGATATTCACCGACACGTCTTTCGAAGAAATTTGTTTTGCCTTCTAAC 11466 Query 23269 GATATATTTTCCATAAAATCAAATGGATT 23297 || || | ||||||||||| || ||||| Sbjct 11465 GAAATGTGCTCCATAAAATCGAAGGGATT 11437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521080346311800