Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rotylenchulus_20reniformis_20[genbank_20GCA_5F001026735.1_202015-06- 12] 100,525 sequences; 313,575,666 total letters Query= AC_000009.1 Length=32621 Score E Sequences producing significant alignments: (Bits) Value seq1252 91.5 3e-14 >seq1252 Length=63427 Score = 91.5 bits (100), Expect = 3e-14 Identities = 110/147 (75%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 31982 TGATTGAAAAGAAGCACCATCACCTCACCGCGGTAATCAGCATCAATCACTCCAGCTCCG 32041 |||||||| | | ||| | | || || |||||||| |||||||||||||||||||| Sbjct 33661 TGATTGAACAACAACACTTTGAGTTCGCCACGGTAATCTTCATCAATCACTCCAGCTCCG 33602 Query 32042 ACATCCAAGCCGCTGGTC-ACAGCAAGTCCGGAACGCGGAGCTATGCGGCCGTAATGACC 32100 ||||| | | || || || ||||| || ||||| ||||| | | ||||| ||||| Sbjct 33601 ACATCGATG-AAATGCTCGACTGCAAGACCTGAACGAGGAGCGACCCTTCCGTAGTGACC 33543 Query 32101 AGGAGGTATTTGCAGCCGTAGTCCAGT 32127 |||||| || |||||| || ||||| Sbjct 33542 AGGAGGGATGGCCAGCCGGAGACCAGT 33516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104141134569150