Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rotylenchulus_20reniformis_20[genbank_20GCA_5F001026735.1_202015-06- 12] 100,525 sequences; 313,575,666 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2067 136 4e-27 seq8832 132 5e-26 seq10184 127 2e-24 seq1539 114 1e-20 seq8845 107 2e-18 seq3991 105 7e-18 seq51152 102 8e-17 seq2970 100 3e-16 seq3766 93.3 4e-14 seq482 93.3 4e-14 seq6138 84.2 2e-11 >seq2067 Length=34267 Score = 136 bits (150), Expect = 4e-27 Identities = 144/187 (77%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || ||||| || || || || |||||| | || || || | | | Sbjct 29764 ATGCAAATCTTCGTGAAGACGCTGACCGGGAAGACGATCACCATGGATGTGGAGTCGAAC 29705 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | ||| | |||| | |||| || || | ||||| ||||||||||| ||||||| Sbjct 29704 GATACAGTGGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCA 29646 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| |||||||||| ||| |||||||| ||||| |||| |||||||| ||||||||| Sbjct 29645 GCAGCGACTCATCTTCGCCGGCAAACAACTGGAGGACGGACGCACCCTGGCCGACTACAA 29586 Query 40869 CATCCAG 40875 ||| ||| Sbjct 29585 CATTCAG 29579 >seq8832 Length=4481 Score = 132 bits (146), Expect = 5e-26 Identities = 143/187 (76%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || ||||| || || || || ||||| | ||| | || | | | Sbjct 786 ATGCAAATCTTCGTGAAGACGCTGACCGGGAAGACGATCACACTGGACATGGAGTCGAAC 727 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| ||| | |||| | |||| || || | || || ||||||||||| ||||||| Sbjct 726 GACACGGTGGAGAACG-TGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCGCCGGACCA 668 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||||||||||| ||| |||||||| ||||| || | |||||||| ||||||||| Sbjct 667 GCAACGACTCATCTTCGCCGGCAAACAACTGGAGGATGGACGCACCCTGGCCGACTACAA 608 Query 40869 CATCCAG 40875 ||| ||| Sbjct 607 CATTCAG 601 >seq10184 Length=3342 Score = 127 bits (140), Expect = 2e-24 Identities = 142/187 (76%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || || || || |||||| | || || || | | | Sbjct 972 ATGCAAATCTTCGTGAAGACACTGACCGGGAAGACGATCACCATGGATGTGGAGTCGAAC 913 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| ||| | |||| | |||| || || | ||||| || |||||||| ||||||| Sbjct 912 GACACGGTGGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCGCCGGACCA 854 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||||| |||| ||| |||||||| ||||| |||| |||||||| ||||||||| Sbjct 853 GCAGCGACTTATCTTCGCCGGCAAACAACTGGAGGACGGACGCACCCTGGCCGACTACAA 794 Query 40869 CATCCAG 40875 ||| ||| Sbjct 793 CATTCAG 787 >seq1539 Length=61058 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| ||||| ||||| || || || |||||||| ||| | || ||||| || Sbjct 9118 AATGCAAATTTTCGTGAAAACCCTGACCGGAAAAACCATAACCCTGGAGGTCGAGAGCAG 9177 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | | | || | ||| || || || |||||||| || | || || Sbjct 9178 TGATACCATTGATAATGTGAAAGCAAAGATCACTGATAAGGAGGGCATTCCAACTGATCA 9237 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| ||||||| ||||| ||||| || || || | ||||| | ||| ||||| Sbjct 9238 GCAACGCCTCATCTTTGCGGGAAAACAACTCGAAGATGGCCGCACTTTGGCCGATTACAA 9297 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| |||||||| || || || | || |||||| | ||||| || Sbjct 9298 CATCCAAAAGGAGGCAACCCTTCACTTGGTTTTGCGCCTCAGGGGAGG 9345 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || ||||| | || || |||||||| ||| | || ||||| || Sbjct 9346 AATGCAAATTTTTGTGAAAACTTTGACCGGAAAAACCATAACCTTGGAGGTCGAGAGCAG 9405 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | | | || | ||| || || || |||||||| || | || || Sbjct 9406 TGATACCATTGATAATGTGAAAGCAAAGATCACTGATAAGGAGGGCATTCCAACTGATCA 9465 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| ||||||| || || ||||| |||| || | ||||| | ||| ||||| Sbjct 9466 GCAACGCCTCATCTTTGCAGGAAAACAATTGGAAGATGGCCGCACTTTGGCCGATTACAA 9525 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| |||||||| || || || | || |||||| | ||||| || Sbjct 9526 CATCCAAAAGGAGGCAACCCTTCACTTGGTTTTGCGCCTCAGGGGAGG 9573 >seq8845 Length=2813 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 116974 CGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGG 117033 |||||| | ||||| || ||||| | || ||||| || ||||| | ||||| Sbjct 1860 CGTCAAGAAAAAGGCAGATTGGGCATTACGTTGGATTTCCAATCATGAGGCTACATTCGG 1919 Query 117034 CGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGC 117093 || | |||| || |||||||| ||||| || | ||||| ||||||||||| || || Sbjct 1920 AGAAAGATTGGTCGCATTCGCGGCGGTCGAAGGAATTTTCTTCTCGGGCAGTTTTGCAGC 1979 Query 117094 CATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCAT 117153 || || ||||| ||||||||||| || ||||| || || || |||||| || || || Sbjct 1980 AATTTTCTGGCTGAAGAAACGCGGTCTAATGCCTGGTCTCACACACAGCAATGAACTAAT 2039 Query 117154 CTCCAGGGACGAGG 117167 ||| | || |||| Sbjct 2040 CTCGCGCGATGAGG 2053 >seq3991 Length=17808 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || ||||| || ||||| |||||||| ||| | || |||| | Sbjct 12289 AATGCAGATTTTTGTGAAAACCCTAACGGGAAAAACCATAACCTTGGAATGCGAAAGTTC 12230 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | ||| | | | |||| ||||| | ||||| ||||| ||||| ||||||| Sbjct 12229 TGATACCGTAGACAATGTGAAGGCGAAAATCCAGGACAAGGAGGGTATCCCACCGGACCA 12170 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| | || | || || ||||| || || || | || || | ||| ||||| Sbjct 12169 ACAACGGTTGATTTTTGCAGGAAAACAACTCGAGGATGGTCGTACTTTGGCCGATTACAA 12110 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| |||||| | || || ||| | ||||||||| | ||||| || Sbjct 12109 CATCCAAAAGGAGTCAACCCTCCATTTGGTGTTGCGCCTCAGGGGAGG 12062 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| ||||||||||| || || || ||||| || ||| | || ||| | Sbjct 12061 AATGCAAATTTTCGTAAAAACTCTGACTGGAAAAACTATAACCCTAGAATGTGAAAGTTC 12002 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | || | | | |||| ||||| | ||||| ||||| ||||| ||||||| Sbjct 12001 TGATACTGTAGACAATGTGAAGGCGAAAATCCAGGACAAGGAGGGTATCCCGCCGGACCA 11942 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || || | || || ||||| |||| || | || || | ||| ||||| Sbjct 11941 GCAACGCCTGATTTTTGCAGGAAAACAATTGGAAGATGGCCGAACTTTGGCCGATTACAA 11882 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGG 40919 |||||| |||||| | || || || | || ||||| | ||||| || || Sbjct 11881 CATCCAAAAGGAGTCAACCCTCCACTTGGTTCTGCGCCTCAGGGGAGGTGG 11831 >seq51152 Length=820 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 116974 CGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGG 117033 |||||| | ||||| || ||||| | || ||||| || ||||| | ||||| Sbjct 222 CGTCAAGAAAAAGGCAGATTGGGCATTACGTTGGATTTCCAATCATGAGGCTACATTCGG 163 Query 117034 CGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGC 117093 || | |||| || |||||||| ||||| || | ||||| ||||||||||| || || Sbjct 162 AGAAAGATTGGTCGCATTCGCGGCGGTCGAAGGAATTTTCTTCTCGGGCAGTTTTGCAGC 103 Query 117094 CATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCAT 117153 || || ||| | ||||||||||| || ||||| || || || |||||| || || || Sbjct 102 AATTTTCTGGTTGAAGAAACGCGGTCTAATGCCGGGTCTCACACACAGCAATGAACTAAT 43 Query 117154 CTCCAGGGACGAGG 117167 ||| | || |||| Sbjct 42 CTCGCGCGATGAGG 29 >seq2970 Length=24236 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || ||||| | || || |||||||| ||| | || ||||| || Sbjct 7644 AATGCAAATTTTTGTGAAAACTTTGACCGGAAAAACCATAACCTTGGAGGTCGAGAGCAG 7703 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | | | || | ||| || ||||| |||||||| || | || || Sbjct 7704 TGATACCATTGATAATGTGAAAGCAAAGATCACTGACAAGGAGGGCATACCGACTGATCA 7763 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| || |||| ||||| ||||| || || || | ||||| | ||| ||||| Sbjct 7764 ACAACGCCTGATCTTTGCGGGGAAACAACTCGAAGATGGCCGCACTTTAGCCGATTACAA 7823 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| || ||||| || || ||| | || |||||| | ||||| || Sbjct 7824 CATCCAAAAAGAGGCAACCCTTCATTTGGTTTTGCGCCTCAGGGGAGG 7871 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || ||||| | || || |||||||| ||| | || ||||| || Sbjct 8100 AATGCAAATTTTTGTGAAAACTTTGACCGGAAAAACCATAACCTTGGAGGTCGAGAGCAG 8159 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | | | || | ||| || ||||| |||||||| || | || || Sbjct 8160 TGATACCATTGATAATGTGAAAGCAAAGATCACTGACAAGGAGGGCATACCGACTGATCA 8219 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| || |||| ||||| ||||| || || || | || || | ||| ||||| Sbjct 8220 ACAACGCCTGATCTTTGCGGGGAAACAACTCGAAGATGGCCGAACTTTGGCCGATTACAA 8279 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| |||||||| || || || | || |||||| | ||||| || Sbjct 8280 CATCCAAAAGGAGGCAACCCTTCACTTGGTTTTGCGCCTCAGGGGAGG 8327 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| ||||| ||||| || || || |||||||| ||| | || ||| | Sbjct 14268 AATGCAAATTTTCGTGAAAACTCTGACCGGAAAAACCATAACCCTGGAATGTGAAAGTTC 14327 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | || | | | |||| |||||| | ||||| ||||| ||||| |||| || Sbjct 14328 GGATACTGTAGACAATGTGAAGGCAAAAATCCAGGACAAGGAGGGTATCCCACCGGATCA 14387 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| || || ||||| |||| || | || || | ||| ||||| Sbjct 14388 GCAACGTTTGATCTTTGCAGGAAAACAATTGGAAGATGGCCGTACTTTGGCCGATTACAA 14447 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGG 40919 |||||| |||||| | || || || | || |||||| | || || || || Sbjct 14448 CATCCAAAAGGAGTCAACCCTCCACTTGGTTTTGCGCCTTAGAGGAGGTGG 14498 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || ||||| | || || |||||||| ||| | || ||||| || Sbjct 7872 AATGCAAATTTTTGTGAAAACTTTGACCGGGAAAACCATAACCCTGGAGGTCGAGAGTAC 7931 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | || | ||| || ||||| || || || || | || || Sbjct 7932 TGACACAATTGATAATATTAAAGCAAAGATCACTGACAAGGAAGGTATTCCGACTGATCA 7991 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| || |||| ||||| ||||| || || || | || || | ||| ||||| Sbjct 7992 ACAACGCCTGATCTTTGCGGGAAAACAACTCGAAGATGGCCGAACTTTGGCCGATTACAA 8051 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| |||||||| || || || | || |||||| | ||||| || Sbjct 8052 CATCCAAAAGGAGGCAACCCTCCACTTGGTTTTGCGCCTCAGGGGAGG 8099 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || ||||| || || || |||||||| ||| | || ||| | Sbjct 14040 AATGCAGATTTTTGTGAAAACCCTGACCGGAAAAACCATAACCCTGGAATGTGAAAGTTC 14099 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | || | | | |||| |||||| | ||||| ||||| ||||| |||| || Sbjct 14100 GGATACTGTAGACAATGTGAAGGCAAAAATCCAGGACAAGGAGGGTATCCCACCGGATCA 14159 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || || | || || ||||| |||| || | ||||| | ||||||||| Sbjct 14160 GCAACGGCTGATTTTTGCAGGAAAACAATTGGAAGATGGCCGCACTTTGGCCGACTACAA 14219 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| || || | || || || | || ||||| | ||||| || Sbjct 14220 CATCCAAAAAGAATCAACCCTCCACTTGGTTCTGCGCCTCAGGGGAGG 14267 >seq3766 Length=16830 Score = 93.3 bits (102), Expect = 4e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 117029 TTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTC 117088 ||||| || | |||| || |||||||| ||||| || | ||||| ||||||||||| Sbjct 8 TTCGGAGAAAGATTGGTCGCATTCGCGGCGGTCGAAGGAATTTTCTTCTCGGGCAGTTTT 67 Query 117089 GCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAG 117148 || || || || ||| | ||||||||||| || ||||| || || || |||||| || Sbjct 68 GCAGCAATTTTCTGGTTGAAGAAACGCGGTCTAATGCCGGGTCTCACACACAGCAATGAA 127 Query 117149 CTCATCTCCAGGGACGAGG 117167 || ||||| | || |||| Sbjct 128 CTAATCTCGCGCGATGAGG 146 >seq482 Length=68918 Score = 93.3 bits (102), Expect = 4e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 117029 TTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTC 117088 ||||| || | |||| || |||||||| ||||| || | ||||| ||||||||||| Sbjct 68911 TTCGGAGAAAGATTGGTCGCATTCGCGGCGGTCGAAGGAATTTTCTTCTCGGGCAGTTTT 68852 Query 117089 GCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAG 117148 || || || || ||| | ||||||||||| || ||||| || || || |||||| || Sbjct 68851 GCAGCAATTTTCTGGTTGAAGAAACGCGGTCTAATGCCGGGTCTCACACACAGCAATGAA 68792 Query 117149 CTCATCTCCAGGGACGAGG 117167 || ||||| | || |||| Sbjct 68791 CTAATCTCGCGCGATGAGG 68773 >seq6138 Length=12267 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| ||||| || || |||||||||||||| | || ||||| |||| Sbjct 8597 AATGCAGATTTTCGTCAAAACTCTGACAGGCAAAACCATCACTCTGGAGGTCGAGGCCAG 8538 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||||| | | | | |||||| || || | |||||||| |||||||| |||| || Sbjct 8537 CGACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCGCCGGATCA 8478 Query 40809 GCAACGACT 40817 || || || Sbjct 8477 ACAGCGCCT 8469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514571794874000