Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rotylenchulus_20reniformis_20[genbank_20GCA_5F001026735.1_202015-06- 12] 100,525 sequences; 313,575,666 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2518 84.2 3e-11 >seq2518 Length=16751 Score = 84.2 bits (92), Expect = 3e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273 ||| ||||| || || ||| || ||||| | ||||| || | || || | | || Sbjct 11442 TAGGCCTATGCCGCCCGCCGACTTGGAGATGTACGCGCAGCGGTCCAAAGTCTTGCAAAT 11501 Query 80274 GCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 80333 |||||| ||| || || | |||| |||| || || || |||| ||| |||| | Sbjct 11502 GCCCTCGATGGAGTCGTCGACCATGGTAAGCAGGAAGCAAGATGACAACTGGGGACGGCA 11561 Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 ||| |||||||| || | ||| || || || || || ||||||||||| |||| | || Sbjct 11562 AGTGCCCGCATTGAACATGGTCGGTGACGCATGGGTGAACCATTTTTCCGACATCAACTT 11621 Query 80394 GTACGTCTCAA 80404 ||||| || || Sbjct 11622 GTACGACTAAA 11632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717366250361000