Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rotylenchulus_20reniformis_20[genbank_20GCA_5F001026735.1_202015-06- 12] 100,525 sequences; 313,575,666 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq8845 84.2 3e-11 >seq8845 Length=2813 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 39670 TGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGA 39729 |||||| |||||||||||||| || || || ||||| || || || |||||| || || Sbjct 2022 TGTGAGACCAGGCATTAGACCGCGTTTCTTCAGCCAGAAAATTGCTGCAAAACTGCCCGA 1963 Query 39730 AAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCG 39775 ||||| || ||||| || || || ||||| || | ||| |||||| Sbjct 1962 GAAGAAAATTCCTTCGACCGCCGCGAATGCGACCAATCTTTCTCCG 1917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686045656161000