Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rotylenchulus_20reniformis_20[genbank_20GCA_5F001026735.1_202015-06- 12] 100,525 sequences; 313,575,666 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3991 127 2e-24 seq27157 123 3e-23 seq6138 123 3e-23 seq2067 123 3e-23 seq2297 120 3e-22 seq8832 111 2e-19 seq2970 111 2e-19 seq10184 107 2e-18 seq9051 102 9e-17 seq5492 102 9e-17 seq92520 98.7 1e-15 seq12421 98.7 1e-15 seq2518 98.7 1e-15 seq22 98.7 1e-15 seq615 93.3 5e-14 >seq3991 Length=17808 Score = 127 bits (140), Expect = 2e-24 Identities = 163/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| || || || || || || || || || |||| | || | || Sbjct 12289 AATGCAGATTTTTGTGAAAACCCTAACGGGAAAAACCATAAC-CTTG-GAATGCGAAAGT 12232 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | |||| | | | ||| ||||||| ||||| |||||||||||||| || || || ||| Sbjct 12231 TCTGATACCGTAGACAATGTGAAGGCGAAAATCCAGGACAAGGAGGGTATCCCACCGGAC 12172 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || || || | |||||||| || || ||||||||||||| |||||| | || || || Sbjct 12171 CAACAACGGTTGATTTTTGCAGGAAAACAACTCGAGGATGGTCGTACTTTGGCCGATTAC 12112 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 || |||||||||| || || || ||| | || ||||| || Sbjct 12111 AACATCCAAAAGGAGTCAACCCTCCATTTGGTGTTGCGCCT 12071 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || || || || || || || || ||||| || || || ||| Sbjct 12061 AATGCAAATTTTCGTAAAAACTCTGACTGGAAAAACTATAACCCTAGAATGTGAAAGTTC 12002 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| | | ||| ||||||| ||||| |||||||||||||| || || || ||||| Sbjct 12001 TGATACTGTAGACAATGTGAAGGCGAAAATCCAGGACAAGGAGGGTATCCCGCCGGACCA 11942 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| || || |||||||| || || ||| | || |||| || || | || || || || Sbjct 11941 GCAACGCCTGATTTTTGCAGGAAAACAATTGGAAGATGGCCGAACTTTGGCCGATTACAA 11882 Query 27585 TGTCCAAAAGGAATCCACTCTTCA 27608 |||||||||| || || || || Sbjct 11881 CATCCAAAAGGAGTCAACCCTCCA 11858 >seq27157 Length=1261 Score = 123 bits (136), Expect = 3e-23 Identities = 104/128 (81%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| || ||||||||||| ||||| | || |||||| | | Sbjct 752 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACCATTACCTTGGAAGTTGAGGCCAGC 811 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||| || |||||||||||||| || |||||||| || ||| Sbjct 812 GACACGATTGAAAATGTCAAGGCCAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAG 871 Query 27526 CAGCGTCT 27533 || ||||| Sbjct 872 CAACGTCT 879 Score = 93.3 bits (102), Expect = 5e-14 Identities = 93/118 (79%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || || || |||||||| |||||||| | ||| ||||| || || || ||| |||| ||| Sbjct 938 ATCTTCGCCGGTAAGCAGCTCGAGGACGGTCGCACCCTTGCTGATTACAATATCCAGAAG 997 Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAAAGTTTTTCCT 27652 || || || |||||| | || ||||||||||| |||||| ||| ||| |||||||| Sbjct 998 GAGTCGACGCTTCATTTGGTGTTGCGTCTTCGTGGTGGA-AAG-GTAACATTTTTCCT 1053 >seq6138 Length=12267 Score = 123 bits (136), Expect = 3e-23 Identities = 104/128 (81%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||| || || || |||||||| || ||||||||||| ||| || || Sbjct 9329 ATGCAAATTTTCGTCAAAACTCTCACTGGCAAGACCATAACTCTTGAGGTCGAGGCAAGT 9270 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || ||||| |||||||| ||||||||||| || ||| Sbjct 9269 GACACCATCGAAAACGTCAAGGCCAAGATTCAAGACAAGGAAGGAATTCCTCCGGATCAG 9210 Query 27526 CAGCGTCT 27533 |||||||| Sbjct 9209 CAGCGTCT 9202 Score = 93.3 bits (102), Expect = 5e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || || ||||| ||||| |||||||| | || ||||| || ||||| ||| |||| ||| Sbjct 8695 ATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTTGCTGACTACAATATCCAGAAG 8636 Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || ||||| ||||| | ||||||||||||||||| ||| Sbjct 8635 GAGTCCACACTTCACTTGGTCTTGCGTCTTCGCGGCGGA 8597 Score = 89.7 bits (98), Expect = 6e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 ||||| || || |||||||| ||||||| |||||| || || || || || |||||||| Sbjct 9152 ATTTTCGCAGGGAAGCAACTTGAGGATGGTCGTACACTTGCGGATTACAACATCCAAAAG 9093 Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || || || ||||| | ||||||||||| ||||| ||| Sbjct 9092 GAGTCAACACTTCACTTGGTCTTGCGTCTGCGCGGAGGA 9054 >seq2067 Length=34267 Score = 123 bits (136), Expect = 3e-23 Identities = 137/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || |||||||| ||||| ||||| || || | || || ||||| Sbjct 29764 ATGCAAATCTTCGTGAAGACGCTGACCGGGAAGACGATCACCATGGATGTGGAGTCGAAC 29705 Query 27466 GATAGCATTGCA-AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| || || | || ||||||| || || |||||||||||||| || || || ||||| Sbjct 29704 GATA-CAGTGGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCA 29646 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| || || || || || || ||||| ||||| | || ||||| || ||||| || Sbjct 29645 GCAGCGACTCATCTTCGCCGGCAAACAACTGGAGGACGGACGCACCCTGGCCGACTACAA 29586 >seq2297 Length=32998 Score = 120 bits (132), Expect = 3e-22 Identities = 102/126 (81%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| || ||||||||||| ||||| | || |||||| | | Sbjct 2915 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACCATTACCTTGGAAGTTGAGGCCAGC 2974 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||| || |||||||||||||| || |||||||| || ||| Sbjct 2975 GACACGATTGAAAATGTCAAGGCCAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAG 3034 Query 27526 CAGCGT 27531 || ||| Sbjct 3035 CAACGT 3040 Score = 91.5 bits (100), Expect = 2e-13 Identities = 87/110 (79%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 27541 GCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCC 27600 || |||||||| |||||||| | ||| ||||| || || || ||| |||| ||||| || Sbjct 3102 GCCGGTAAGCAGCTCGAGGACGGTCGCACCCTTGCTGATTACAATATCCAGAAGGAGTCG 3161 Query 27601 ACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAAAGTTTTTC 27650 || |||||| | || ||||||||||| |||||| ||| | | | |||||| Sbjct 3162 ACGCTTCATTTGGTGTTGCGTCTTCGTGGTGGA-AAGGTAACATTTTTTC 3210 >seq8832 Length=4481 Score = 111 bits (122), Expect = 2e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || |||||||| ||||| ||||| || || || || | ||||| Sbjct 786 ATGCAAATCTTCGTGAAGACGCTGACCGGGAAGACGATCACACTGGACATGGAGTCGAAC 727 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | | | || ||||||| || || ||||| |||||||| || || || |||||| Sbjct 726 GACACGGTGGAGAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCGCCGGACCAG 667 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || || || || || || || || ||||| ||||||| || ||||| || ||||| || Sbjct 666 CAACGACTCATCTTCGCCGGCAAACAACTGGAGGATGGACGCACCCTGGCCGACTACAA 608 >seq2970 Length=24236 Score = 111 bits (122), Expect = 2e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| || || | ||||| || || || || | ||||| ||| | Sbjct 7644 AATGCAAATTTTTGTGAAAACTTTGACCGGAAAAACCATAACCTTGGAGGTCGAGAGCAG 7703 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| ||||| ||| |||| || || || ||||||||||| || || | || || Sbjct 7704 TGATACCATTGATAATGTGAAAGCAAAGATCACTGACAAGGAGGGCATACCGACTGATCA 7763 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || || || || ||||| || || |||||||| |||| || || |||| || || || Sbjct 7764 ACAACGCCTGATCTTTGCGGGGAAACAACTCGAAGATGGCCGCACTTTAGCCGATTACAA 7823 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 ||||||| || | || |||||| | || ||||| || Sbjct 7824 CATCCAAAAAGAGGCAACCCTTCATTTGGTTTTGCGCCT 7862 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| || || | ||||| || || || || | ||||| ||| | Sbjct 8100 AATGCAAATTTTTGTGAAAACTTTGACCGGAAAAACCATAACCTTGGAGGTCGAGAGCAG 8159 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| ||||| ||| |||| || || || ||||||||||| || || | || || Sbjct 8160 TGATACCATTGATAATGTGAAAGCAAAGATCACTGACAAGGAGGGCATACCGACTGATCA 8219 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || || || || ||||| || || |||||||| |||| || || | || || || || Sbjct 8220 ACAACGCCTGATCTTTGCGGGGAAACAACTCGAAGATGGCCGAACTTTGGCCGATTACAA 8279 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 |||||||||| | || ||||| | || ||||| || Sbjct 8280 CATCCAAAAGGAGGCAACCCTTCACTTGGTTTTGCGCCT 8318 Score = 107 bits (118), Expect = 2e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || || || || || ||||| || || || || || || ||| || Sbjct 14268 AATGCAAATTTTCGTGAAAACTCTGACCGGAAAAACCATAACCCTGGAATGTGAA--AGT 14325 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | |||| | | ||| ||||||| ||||| |||||||||||||| || || || || Sbjct 14326 TCGGATACTGTAGACAATGTGAAGGCAAAAATCCAGGACAAGGAGGGTATCCCACCGGAT 14385 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||| ||| | || ||||| || || ||| | || |||| ||||| | || || || Sbjct 14386 CAGCAACGTTTGATCTTTGCAGGAAAACAATTGGAAGATGGCCGTACTTTGGCCGATTAC 14445 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||||||||| || || || || | || ||||| ||| | || || Sbjct 14446 AACATCCAAAAGGAGTCAACCCTCCACTTGGTTTTGCGCCTTAGAGGAGG 14495 Score = 105 bits (116), Expect = 8e-18 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| || || || ||||| || || || || || || ||| || Sbjct 14040 AATGCAGATTTTTGTGAAAACCCTGACCGGAAAAACCATAACCCTGGAATGTGAA--AGT 14097 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | |||| | | ||| ||||||| ||||| |||||||||||||| || || || || Sbjct 14098 TCGGATACTGTAGACAATGTGAAGGCAAAAATCCAGGACAAGGAGGGTATCCCACCGGAT 14157 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||| || || |||||||| || || ||| | || |||| || || | || ||||| Sbjct 14158 CAGCAACGGCTGATTTTTGCAGGAAAACAATTGGAAGATGGCCGCACTTTGGCCGACTAC 14217 Query 27583 AATGTCCAAAAGGAATCCACTCTTCA 27608 || ||||||| ||||| || || || Sbjct 14218 AACATCCAAAAAGAATCAACCCTCCA 14243 >seq10184 Length=3342 Score = 107 bits (118), Expect = 2e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || ||||| ||||| || || | || || ||||| Sbjct 972 ATGCAAATCTTCGTGAAGACACTGACCGGGAAGACGATCACCATGGATGTGGAGTCGAAC 913 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | | | || ||||||| || || ||||||||||| || || || || |||||| Sbjct 912 GACACGGTGGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCGCCGGACCAG 853 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||| || || || || || || ||||| ||||| | || ||||| || ||||| || Sbjct 852 CAGCGACTTATCTTCGCCGGCAAACAACTGGAGGACGGACGCACCCTGGCCGACTACAA 794 >seq9051 Length=5414 Score = 102 bits (112), Expect = 9e-17 Identities = 100/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| || ||||||||||| || ||||| ||||| ||| | | Sbjct 3913 AATGCAGATTTTCGTCAAGACACTGACCGGCAAGACGATCACTCTGGAGGTCGAGGCCAG 3854 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||| | ||| | ||||| || || || || |||||||| ||||| || || || Sbjct 3853 TGACACCATCGAGAATGTCAAGGCCAAGATCCAAGATAAGGAGGGCATTCCGCCGGATCA 3794 Query 27525 GCAGCGTCT 27533 |||||| || Sbjct 3793 GCAGCGCCT 3785 Score = 93.3 bits (102), Expect = 5e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| |||||||| || || ||||||||||| || || || || ||| | | Sbjct 4489 AATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACTATCACACTGGAAGTCGAGGCTAG 4430 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| ||| | || || || || |||||||| ||||| || || || || || Sbjct 4429 CGACACCATTGAGAATGTCAAAGCCAAGATCCAGGACAAAGAGGGCATCCCGCCGGATCA 4370 Query 27525 GCAGCGTCT 27533 |||||| || Sbjct 4369 GCAGCGCCT 4361 >seq5492 Length=8422 Score = 102 bits (112), Expect = 9e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 |||||| ||| || || |||| || || |||| || || || ||||||| |||||| | Sbjct 5718 ACTCGATGATCTCAGTACACAGGTTGGAGCACTTGATGGTCCCGAGGTTTTGCTGGTTCG 5659 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 ||||| |||||| ||||||||||| |||||||||||| ||||| ||| ||| || Sbjct 5658 ACTTGCGGTTGCACGCGTCCTTGTACACCATGTACGGGGTGCCGGTTTCGGTCTGCGAGG 5599 Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCC 81096 ||| ||| || ||| | ||| || ||| Sbjct 5598 TGATGATCGCTCGCCACAACTCACGGGCC 5570 Score = 86.0 bits (94), Expect = 7e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 80388 GTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGT 80447 ||||| ||||| ||||| || | ||||||||| |||||||| || |||||| ||| || Sbjct 6698 GTTTGATGTGTATGGCTCGAAGGACTCGTTGTTGCCGAGGATTTGGGCCGTGGACGCGGT 6639 Query 80448 CGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTT 80489 ||||||||| |||||| ||| || |||| |||||||| Sbjct 6638 CGGCATCGGCGCGACCAGCAGACTGTTGCGCACTCCGTGCTT 6597 >seq92520 Length=532 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 27397 ATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTT 27456 || || || ||||||||||| ||||| || || || || ||||| || ||| | || || Sbjct 160 ATCACCATCATGCAAATCTTCGTCAAAACCCTGACTGGAAAGACCATCACTTTGGAAGTC 101 Query 27457 GAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCT 27516 ||| | | || | || | ||| | ||||| || || ||||||||||| ||||||||| Sbjct 100 GAGGCTAGCGACACAATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCT 41 Query 27517 CCAGACCAGCAGCGTCT 27533 || ||||||||||| || Sbjct 40 CCGGACCAGCAGCGCCT 24 >seq12421 Length=2797 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 |||||| ||| || ||||||| || || |||| || || || ||||| | |||||| | Sbjct 1244 ACTCGATGATCTCAGTGCACAGGTTGGAGCACTTGATGGTCCCGAGGTTCTGCTGGTTCG 1303 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 ||||| |||||| ||||||||||| ||| || ||||| ||||||||| ||| || Sbjct 1304 ACTTGCGGTTGCACGCGTCCTTGTACACCATATATGGGGTGCCGGTCTCGGTCTGCGAGG 1363 Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCC 81096 ||| ||| || ||| | ||| || ||| Sbjct 1364 TGATGATCGCTCGCCACAACTCACGGGCC 1392 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 80395 GTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATC 80454 ||||| |||||||| | ||||||||| |||||||| || |||||| ||| ||||||||| Sbjct 175 GTGTATGGCTCAAAGGACTCGTTGTTGCCGAGGATTTGGGCCGTGGACGCGGTCGGCATC 234 Query 80455 GGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTT 80489 || | |||| ||| || |||| |||||||| Sbjct 235 GGCGCAACCAGCAGACTGTTGCGCACCCCGTGCTT 269 >seq2518 Length=16751 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 |||||| ||| || ||||||| || || |||| || || || || || | |||||| | Sbjct 10604 ACTCGATGATCTCGGTGCACAGGTTGGAGCACTTGATGGTCCCGAGATTCTGCTGGTTCG 10663 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 ||||| |||||| ||||||||||| |||||||||||| ||||| ||| ||| || Sbjct 10664 ACTTGCGGTTGCACGCGTCCTTGTACACCATGTACGGGGTGCCGGTTTCGGTCTGCGAGG 10723 Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCC 81096 ||| ||| || ||| | ||| || ||| Sbjct 10724 TGATGATCGCTCTCCACAGCTCACGGGCC 10752 >seq22 Length=212208 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || ||||| ||||| || || || ||||| || | | Sbjct 71810 AATGCAGATCTTCGTGAAGACACTCACCGGGAAGACCATCACCCTGGAGGTCGAAGCCAG 71751 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||| | || | ||||| || || ||||||||||| |||||||| || ||||| Sbjct 71750 TGACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCGGACCA 71691 Query 27525 GCAGCGTCT 27533 |||||| || Sbjct 71690 GCAGCGCCT 71682 Score = 93.3 bits (102), Expect = 5e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || ||||| ||||| || || || ||||| || | | Sbjct 70738 AATGCAGATCTTCGTGAAGACACTCACCGGGAAGACCATCACCCTGGAGGTCGAAGCCAG 70679 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||| | || | ||||| || || ||||||||||| ||||| || || ||||| Sbjct 70678 TGACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCGCCGGACCA 70619 Query 27525 GCAGCG 27530 |||||| Sbjct 70618 GCAGCG 70613 Score = 93.3 bits (102), Expect = 5e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || ||||| ||||| || || || ||||| || | | Sbjct 71530 AATGCAGATCTTCGTGAAGACACTCACCGGGAAGACCATCACCCTGGAGGTCGAAGCCAG 71471 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||| | || | ||||| || || ||||||||||| ||||| || || ||||| Sbjct 71470 TGACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCGCCGGACCA 71411 Query 27525 GCAGCG 27530 |||||| Sbjct 71410 GCAGCG 71405 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||||||||| ||||| || || || || ||||| || ||||| || || ||| | Sbjct 72094 ATCATGCAAATCTTCGTCAAAACCCTGACTGGAAAGACCATAACTCTGGAAGTCGAGGCT 72035 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | || | ||| | ||||| || || ||||||||||| || ||||| |||||| Sbjct 72034 AGCGACACAATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCAGAC 71975 Query 27523 CAGCAGCG 27530 || ||||| Sbjct 71974 CAACAGCG 71967 Score = 86.0 bits (94), Expect = 7e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || || ||||| ||||| |||||||||| |||||| || || ||||| || |||| ||| Sbjct 70553 ATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGTACTCTCGCTGACTACAACATCCAGAAG 70494 Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 || || || || || || || ||||||||||| || || ||| Sbjct 70493 GAGTCTACCCTCCACCTTGTGTTGCGTCTTCGTGGAGGCCAA 70452 Score = 86.0 bits (94), Expect = 7e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || || ||||| ||||| |||||||||| |||||| || || ||||| || |||| ||| Sbjct 71345 ATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGTACTCTCGCTGACTACAACATCCAGAAG 71286 Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 || || || || || || || ||||||||||| || || ||| Sbjct 71285 GAGTCTACCCTCCACCTTGTGTTGCGTCTTCGTGGAGGCCAA 71244 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || || ||||| ||||| |||||||| | || || || ||||||||||| |||| ||| Sbjct 71908 ATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACACTGGCAGACTATAACATCCAGAAG 71849 Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || || |||||||| | ||||||||||| || || ||| Sbjct 71848 GAGTCGACTCTTCACTTGGTCTTGCGTCTCCGTGGGGGA 71810 Score = 82.4 bits (90), Expect = 9e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 27541 GCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCC 27600 ||||| ||||| |||||||| | || || || ||||||||||| |||| ||||| || Sbjct 71622 GCTGGCAAGCAGCTCGAGGACGGCCGCACACTGGCAGACTATAACATCCAGAAGGAGTCG 71563 Query 27601 ACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||||||| | ||||||||||| || || ||| Sbjct 71562 ACTCTTCACTTGGTCTTGCGTCTCCGTGGAGGA 71530 >seq615 Length=100005 Score = 93.3 bits (102), Expect = 5e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 |||| | ||| || ||||||| || || |||| || || || ||||| | |||||| | Sbjct 7948 ACTCAATGATCTCAGTGCACAGGTTGGAGCACTTGATGGTCCCGAGGTTCTGCTGGTTCG 8007 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 ||||| |||||| ||||||||||| |||||||||||| || || ||| ||| || Sbjct 8008 ACTTGCGGTTGCACGCGTCCTTGTACACCATGTACGGGGTGCCAGTTTCGGTCTGCGAGG 8067 Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCC 81096 ||| ||| || ||| | ||| || ||| Sbjct 8068 TGATGATCGCTCGCCACAGCTCACGGGCC 8096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569593769338000