Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rotylenchulus_20reniformis_20[genbank_20GCA_5F001026735.1_202015-06- 12] 100,525 sequences; 313,575,666 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq3991 150 4e-31 seq2970 149 1e-30 seq1539 138 2e-27 seq8832 131 4e-25 seq10184 122 2e-22 seq2067 122 2e-22 seq9051 104 5e-17 seq6138 100 6e-16 seq2083 100 6e-16 >seq3991 Length=17808 Score = 150 bits (166), Expect = 4e-31 Identities = 167/220 (76%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 ||||| | |||| ||| | ||| ||||||||||| |||||||| || | |||||| Sbjct 17267 AGGCGCAAAACCAAATGAAGGGTGGCCTCTTTTTGGATATTGTAGTCGGCCAAAGTGCGG 17326 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 ||||| |||||||||||||| |||||||||| |||||||| ||| ||| || |||||| Sbjct 17327 CCATCTTCTAGTTGTTTCCCCGCAAAGATCAGGCGTTGTTGATCAGTCGGTATGCCCTCC 17386 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGACTTCGAGAGT 283060 || || |||||||||||| || |||| || || | | ||| ||||| || | || Sbjct 17387 TTATCAGTGATCTTTGCTTTCACATTATCAATGGTAT-CACTGCTCTCGACCTCCAAGGT 17445 Query 283061 GATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || || || |||||||| || || || || |||||| Sbjct 17446 TATGGTTTTTCCGGTCAAAGTTTTCACAAAAATTTGCATT 17485 Score = 132 bits (146), Expect = 1e-25 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 ||||| | |||| ||| | ||| ||||||||||| |||||||| || | || ||| Sbjct 17039 AGGCGCAAAACCAAATGAAGGGTGGCCTCTTTTTGGATATTGTAGTCGGCCAAAGTACGG 17098 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 ||||| || | ||||||||| |||||||||| ||||| || ||| ||||| |||||| Sbjct 17099 CCATCTTCCAATTGTTTCCCCGCAAAGATCAGGCGTTGCTGATCAGTTGGAATGCCCTCC 17158 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGACTTCGAGAGT 283060 || || |||||||||||| || |||| || || | | ||| ||||| || | || Sbjct 17159 TTATCAGTGATCTTTGCTTTCACATTATCAATGGTAT-CACTGCTCTCGACCTCCAAGGT 17217 Query 283061 GATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || || || |||||||| || || || || |||||| Sbjct 17218 TATGGTTTTTCCGGTCAAAGTTTTCACAAAAATTTGCATT 17257 Score = 125 bits (138), Expect = 1e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || |||||||||||||| || || | || |||||||| || | |||||| || ||||| Sbjct 11870 TCCTTTTGGATGTTGTAATCGGCCAAAGTTCGGCCATCTTCCAATTGTTTTCCTGCAAAA 11929 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| ||||| ||||| ||| |||||||||||||| ||||| || || || || | Sbjct 11930 ATCAGGCGTTGCTGGTCCGGCGGGATACCCTCCTTGTCCTGGATTTTCGCCTTCACATTG 11989 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || | ||| || ||| ||| ||| || || || || || || |||| ||| || ||| Sbjct 11990 TCTACAGTATCAGAACTTTCACATTCTAGGGTTATAGTTTTTCCAGTCAGAGTTTTTACG 12049 Query 283089 AATATCTGCATT 283100 || || |||||| Sbjct 12050 AAAATTTGCATT 12061 Score = 125 bits (138), Expect = 1e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || |||||||||||||| || || | || || |||||||| |||||||| || ||||| Sbjct 12098 TCCTTTTGGATGTTGTAATCGGCCAAAGTACGACCATCCTCGAGTTGTTTTCCTGCAAAA 12157 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| ||||||||||| || |||||||||||||| ||||| || || || || | Sbjct 12158 ATCAACCGTTGTTGGTCCGGTGGGATACCCTCCTTGTCCTGGATTTTCGCCTTCACATTG 12217 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || | || || ||| |||| ||| | || || || || ||||| | || || || Sbjct 12218 TCTACGGTATCAGAACTTTCGCATTCCAAGGTTATGGTTTTTCCCGTTAGGGTTTTCACA 12277 Query 283089 AATATCTGCATT 283100 || ||||||||| Sbjct 12278 AAAATCTGCATT 12289 >seq2970 Length=24236 Score = 149 bits (164), Expect = 1e-30 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || |||||||||||||| || || | || |||||||| || |||||||| || |||||| Sbjct 8063 TCCTTTTGGATGTTGTAATCGGCCAAAGTTCGGCCATCTTCGAGTTGTTTTCCCGCAAAG 8004 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| |||||||| ||| ||||||||| |||||||| |||||||||||| | || Sbjct 8003 ATCAGGCGTTGTTGATCAGTCGGAATACCTTCCTTGTCAGTGATCTTTGCTTTAATATTA 7944 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| | | ||||| || || || || || || || |||||||| || || Sbjct 7943 TCAATTGTGTCAGTACTCTCGACCTCCAGGGTTATGGTTTTCCCGGTCAAAGTTTTCACA 7884 Query 283089 AATATCTGCATT 283100 || || |||||| Sbjct 7883 AAAATTTGCATT 7872 Score = 147 bits (162), Expect = 5e-30 Identities = 150/193 (78%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||||||||||||||| || || | ||||||||||| || ||||||||||| |||||| Sbjct 7835 TCTTTTTGGATGTTGTAATCGGCTAAAGTGCGGCCATCTTCGAGTTGTTTCCCCGCAAAG 7776 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| |||||||| ||| ||| || ||||||||||| |||||||||||| || || Sbjct 7775 ATCAGGCGTTGTTGATCAGTCGGTATGCCCTCCTTGTCAGTGATCTTTGCTTTCACATTA 7716 Query 283029 TCGATAGTGTCCGAAGCT-TCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || || | | ||| ||||| || | || || || || || |||||||| || || Sbjct 7715 TCAATGGTAT-CACTGCTCTCGACCTCCAAGGTTATGGTTTTTCCGGTCAAAGTTTTCAC 7657 Query 283088 GAATATCTGCATT 283100 || || |||||| Sbjct 7656 AAAAATTTGCATT 7644 Score = 140 bits (154), Expect = 7e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || |||||||||||||| || || | || |||||||| || | |||||| || |||||| Sbjct 14459 TCCTTTTGGATGTTGTAATCGGCCAAAGTACGGCCATCTTCCAATTGTTTTCCTGCAAAG 14400 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||||||||| || || || |||||||||||||| ||||| ||||| || || | Sbjct 14399 ATCAAACGTTGCTGATCCGGTGGGATACCCTCCTTGTCCTGGATTTTTGCCTTCACATTG 14340 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || | ||| |||||| ||| ||| || || || || || || |||| ||| || ||| Sbjct 14339 TCTACAGTATCCGAACTTTCACATTCCAGGGTTATGGTTTTTCCGGTCAGAGTTTTCACG 14280 Query 283089 AATATCTGCATT 283100 || || |||||| Sbjct 14279 AAAATTTGCATT 14268 Score = 138 bits (152), Expect = 2e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || |||||||||||||| || || | || |||||||| || ||||||||||| |||||| Sbjct 8291 TCCTTTTGGATGTTGTAATCGGCCAAAGTTCGGCCATCTTCGAGTTGTTTCCCCGCAAAG 8232 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| |||||||| ||| ||| || ||||||||||| |||||||||||| || || Sbjct 8231 ATCAGGCGTTGTTGATCAGTCGGTATGCCCTCCTTGTCAGTGATCTTTGCTTTCACATTA 8172 Query 283029 TCGATAGTGTCCGAAGCT-TCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || || | | ||| ||||| || | || || || || || |||||||| || || Sbjct 8171 TCAATGGTAT-CACTGCTCTCGACCTCCAAGGTTATGGTTTTTCCGGTCAAAGTTTTCAC 8113 Query 283088 GAATATCTGCATT 283100 || || |||||| Sbjct 8112 AAAAATTTGCATT 8100 Score = 138 bits (152), Expect = 2e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 ||||| || |||| || | || ||||||||||||||||||||| || | |||||| Sbjct 14258 AGGCGCAGAACCAAGTGGAGGGTTGATTCTTTTTGGATGTTGTAGTCGGCCAAAGTGCGG 14199 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 ||||| || | |||||| || ||||| |||| ||||| || || || ||||||||| Sbjct 14198 CCATCTTCCAATTGTTTTCCTGCAAAAATCAGCCGTTGCTGATCCGGTGGGATACCCTCC 14139 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 ||||| ||||| ||||| || || | || | ||| |||||| ||| ||| || || Sbjct 14138 TTGTCCTGGATTTTTGCCTTCACATTGTCTACAGTATCCGAACTTTCACATTCCAGGGTT 14079 Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || || || |||| || || || || ||||||||| Sbjct 14078 ATGGTTTTTCCGGTCAGGGTTTTCACAAAAATCTGCATT 14040 >seq1539 Length=61058 Score = 138 bits (152), Expect = 2e-27 Identities = 164/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 ||||| | |||| ||| | ||| ||||||||||| |||||||| || | |||||| Sbjct 9792 AGGCGCAACACCAAATGAAGGGTGGCCTCTTTTTGGATATTGTAGTCGGCCAAAGTGCGG 9733 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 ||||| || |||||||| || |||||||| | ||||| || ||| ||||| |||||| Sbjct 9732 CCATCTTCGAGTTGTTTTCCCGCAAAGATGAGGCGTTGCTGATCAGTTGGAATGCCCTCC 9673 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGACTTCGAGAGT 283060 || || |||||||||||| || |||| || || | | ||| ||||| || ||||| Sbjct 9672 TTATCAGTGATCTTTGCTTTCACATTATCAATGGTAT-CACTGCTCTCGACCTCCAGAGT 9614 Query 283061 GATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || || || |||| || || ||||| || |||||| Sbjct 9613 TATGGTTTTTCCGGTCAGGGTTTTCACGAAAATTTGCATT 9574 Score = 125 bits (138), Expect = 1e-23 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || |||||||||||||| || || | ||||||||||| || |||||||| || |||||| Sbjct 9309 TCCTTTTGGATGTTGTAATCGGCCAAAGTGCGGCCATCTTCGAGTTGTTTTCCCGCAAAG 9250 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | ||||| || ||| ||||| |||||||| || |||||||||||| || || Sbjct 9249 ATGAGGCGTTGCTGATCAGTTGGAATGCCCTCCTTATCAGTGATCTTTGCTTTCACATTA 9190 Query 283029 TCGATAGTGTCCGAAGCT-TCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || || | | ||| ||||| || || || || || || || |||| || || || Sbjct 9189 TCAATGGTAT-CACTGCTCTCGACCTCCAGGGTTATGGTTTTTCCGGTCAGGGTTTTCAC 9131 Query 283088 GAATATCTGCATT 283100 ||| || |||||| Sbjct 9130 GAAAATTTGCATT 9118 Score = 120 bits (132), Expect = 6e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || |||||||||||||| || || | ||||||||||| || | |||||| || |||||| Sbjct 9537 TCCTTTTGGATGTTGTAATCGGCCAAAGTGCGGCCATCTTCCAATTGTTTTCCTGCAAAG 9478 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | ||||| || ||| ||||| |||||||| || |||||||||||| || || Sbjct 9477 ATGAGGCGTTGCTGATCAGTTGGAATGCCCTCCTTATCAGTGATCTTTGCTTTCACATTA 9418 Query 283029 TCGATAGTGTCCGAAGCT-TCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || || | | ||| ||||| || | || || || || || |||||||| || || Sbjct 9417 TCAATGGTAT-CACTGCTCTCGACCTCCAAGGTTATGGTTTTTCCGGTCAAAGTTTTCAC 9359 Query 283088 GAATATCTGCATT 283100 || || |||||| Sbjct 9358 AAAAATTTGCATT 9346 >seq8832 Length=4481 Score = 131 bits (144), Expect = 4e-25 Identities = 140/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974 || ||||||||||| || || ||||| |||||||| |||||||| ||||| ||||| | Sbjct 602 TGAATGTTGTAGTCGGCCAGGGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGATGAGT 661 Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034 ||||| ||||| ||| || |||||||| || |||||||| || || ||| | || | Sbjct 662 CGTTGCTGGTCCGGCGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTTCTCCACC 721 Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATC 283094 ||||| | || | || || ||||||||||| || |||| ||||| ||||| || Sbjct 722 GTGTCGTTCGACTCCATGTCCAGTGTGATCGTCTTCCCGGTCAGCGTCTTCACGAAGATT 781 Query 283095 TGCAT 283099 ||||| Sbjct 782 TGCAT 786 >seq10184 Length=3342 Score = 122 bits (134), Expect = 2e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974 || ||||||||||| || || ||||| || ||||| |||||||| ||||| ||||| | Sbjct 788 TGAATGTTGTAGTCGGCCAGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATAAGT 847 Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034 || || ||||| ||| || || |||||||| |||||||| || || ||| | || | Sbjct 848 CGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCCACC 907 Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATC 283094 ||||| | || || || | ||||||||||| || |||| ||||| ||||| || Sbjct 908 GTGTCGTTCGACTCCACATCCATGGTGATCGTCTTCCCGGTCAGTGTCTTCACGAAGATT 967 Query 283095 TGCAT 283099 ||||| Sbjct 968 TGCAT 972 >seq2067 Length=34267 Score = 122 bits (134), Expect = 2e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974 || ||||||||||| || || ||||| || ||||| |||||||| ||||| ||||| | Sbjct 29580 TGAATGTTGTAGTCGGCCAGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATGAGT 29639 Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034 || || ||||| ||| || ||||||||||| |||||||| || || ||| | || | Sbjct 29640 CGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCCACT 29699 Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATC 283094 || || | || || || | ||||||||||| || |||| ||||| ||||| || Sbjct 29700 GTATCGTTCGACTCCACATCCATGGTGATCGTCTTCCCGGTCAGCGTCTTCACGAAGATT 29759 Query 283095 TGCAT 283099 ||||| Sbjct 29760 TGCAT 29764 >seq9051 Length=5414 Score = 104 bits (114), Expect = 5e-17 Identities = 90/112 (80%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 282989 CGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTC 283048 |||||| |||||||| ||||||||||| || || || | ||||| ||||| || || Sbjct 3802 CGGAATGCCCTCCTTATCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGCCTC 3861 Query 283049 GACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||| || |||||||||||||| || |||| ||||| ||||| ||||||||| Sbjct 3862 GACCTCCAGAGTGATCGTCTTGCCGGTCAGTGTCTTGACGAAAATCTGCATT 3913 Score = 87.8 bits (96), Expect = 4e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 282989 CGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTC 283048 ||| || || ||||||||||| ||||| || || ||| | ||||| ||||| || || Sbjct 4652 CGGGATTCCTTCCTTGTCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCACTTGCCTC 4711 Query 283049 GACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| |||||||| ||||| || || | ||| || ||||| || ||||| Sbjct 4712 GACTTCAAGAGTGATGGTCTTGCCAGTGAGAGTTTTGACGAAAATTTGCAT 4762 >seq6138 Length=12267 Score = 100 bits (110), Expect = 6e-16 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 282971 CAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030 ||| || || || ||| ||| || || || ||||| |||||||| || || || | || Sbjct 8925 CAAGCGCTGCTGATCAGGCGGGATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTCTC 8984 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| ||| ||||| || |||||||| ||||| || ||||||||||| ||||| Sbjct 8985 AATGGTGTCGCTAGCCTCGACCTCCAGAGTGATGGTCTTCCCGGTCAAAGTCTTGACGAA 9044 Query 283091 TATCTGCATT 283100 ||||||||| Sbjct 9045 GATCTGCATT 9054 >seq2083 Length=33917 Score = 100 bits (110), Expect = 6e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 ||||| |||||||||||||||||||| | || || | ||||| ||||| ||| ||| Sbjct 7508 GGAATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTCTCGATGGTGTCGCTAGCCTCG 7449 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| |||||||| ||||| || || | ||||| ||||| |||||||| Sbjct 7448 ACTTCCAGAGTGATGGTCTTCCCGGTGAGTGTCTTCACGAAGATCTGCAT 7399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1045391024443350