Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12]
22,336 sequences; 218,332,512 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq5314 91.5 2e-13
>seq5314
Length=14302
Score = 91.5 bits (100), Expect = 2e-13
Identities = 237/352 (67%), Gaps = 17/352 (5%)
Strand=Plus/Minus
Query 16976 CAATGTAATCC---CTCGTCTC-TGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031
|||||||| || |||||| | || | || |||||||| || || || || |||||
Sbjct 5716 CAATGTAAACCAACCTCGTCGCGTGAT-ATGAGTTCGTTGCTGAACGTTAAACCCGGCAT 5658
Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAA--CGACCCAGAAAAGAATATACCC 17089
|| |||||||| ||||||||||| || ||||| | | | |||| || |||||
Sbjct 5657 AAGACCACGTTTCTTCAACCAAAATATAGCCGCGAAGCTGCCGCTGAAA--AAAATACCT 5600
Query 17090 TCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTC--TTTGTTACGAATCC 17147
||||||| | || || | | ||||| || | | | ||| ||| | ||||
Sbjct 5599 TCGACGGCAGAGAAGGCAACAAGGCGTTCAGCAAAAG--GTGTCGATTTCCCGTGGATCC 5542
Query 17148 ATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA 17207
|| || | |||| || ||||| | ||| | || || |||||| | ||| || || |
Sbjct 5541 ATCTCAACGCCCAGTCTGCTTTCTTCTTCACACACGGCAGCGTTTCGACGGCGTTGAACA 5482
Query 17208 --ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTC 17265
| || |||| | | ||| | || || | |||||| |||| ||||| ||
Sbjct 5481 GCAACTCCCTTTGAGCGG--GGTTTTTGATGTAAGCATCGATAAGTAACGAATACATCTC 5424
Query 17266 GGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCC 17317
|| ||||| || |||| || |||||||| ||||||||| |||| ||||||
Sbjct 5423 AGAATGTATATTTTCCAGTGCAATCTGAAAGCCGTAAAAGTATCGCGCTTCC 5372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517401101268480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |