Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq5314 152 5e-32 >seq5314 Length=14302 Score = 152 bits (168), Expect = 5e-32 Identities = 250/359 (70%), Gaps = 20/359 (6%) Strand=Plus/Plus Query 116819 CAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAAC 116878 || || || |||| | || ||||| | ||| |||||||||||||| || |||| || Sbjct 5355 CAAGAAGTTCAGGCGCTGGAAGCGCGATACTTTTACGGCTTTCAGATTGCACTGGAAAAT 5414 Query 116879 GTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTG--------CGCTCTTCGG 116930 | || || || ||||||||| || ||||| | ||| | ||||| || Sbjct 5415 ATACATTCTGAGATGTATTCGTTACTTATCGATGCTTACATCAAAAACCCCGCTCAAAGG 5474 Query 116931 AGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCG 116990 ||| ||| ||| |||||| |||| ||| ||||||| || || |||| || | Sbjct 5475 --GAGTTGCT------GTTCAACGCCGTCGAAACGCTGCCGTGTGTGAAGAAGAAAGCAG 5526 Query 116991 AGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCT 117050 | |||||| || | |||||| ||| | | | | | || | || ||||| || |||| Sbjct 5527 ACTGGGCGTTGAGATGGATCCACGGGAAATCGACACCTTTTGCTGAACGCCTTGTTGCCT 5586 Query 117051 TCGCGGCCGTCGAGGGCGTCTTCTTTTCGG--GCAGTTTCGCCGCCATATTTTGGCTCAA 117108 || | |||||||| || | || ||||| | |||| ||||| || ||||||||| | || Sbjct 5587 TCTCTGCCGTCGAAGG--TATTTTTTTCAGCGGCAGCTTCGCGGCTATATTTTGGTTGAA 5644 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||||| || || ||||| || | || ||||||||||| ||||| || | ||||||| Sbjct 5645 GAAACGTGGTCTTATGCCGGGTTTAACGTTCAGCAACGAACTCATATCACGCGACGAGG 5703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515075350799360